Parastagonospora nodorum: SNOG_05653
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Entry
SNOG_05653 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pno03021
]
SNOG_05653
03036 Chromosome and associated proteins [BR:
pno03036
]
SNOG_05653
Transcription machinery [BR:
pno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SNOG_05653
Chromosome and associated proteins [BR:
pno03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
SNOG_05653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HTH_44
HHH_7
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_9
Tex_YqgF
SH2
B12-binding
HHH_3
Motif
Other DBs
NCBI-GeneID:
5972928
NCBI-ProteinID:
XP_001796051
UniProt:
Q0URG1
A0A7U2I1K1
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MSTANFFDTAAELGSEEEDEDFDEEGGEVRPKKTNGANGLEDSSEEEDEDDDELLAQEGA
GFVVDEDEEDEEAERKRRRKKKRKNREVDEALDDEDLDLIGVEVERPDETQSRFKRLKRG
HKERARARGIDDIFSDDEPNDDIDEPRRAGLNEFDDFIEDDQFEDEIEDDRDVTQPGINL
ITQGLQAAGLDEGAEEDYRAAFGDGTDYDWALDMQEAEEDEQAGEGRDLQLKDVFEPSQL
QERLLTDDDNIIRETDVPERLQLARKPFKDLELTDEDMQERLKEEAHWITTLLWPKKGLE
GYFHAPFERAVHKVLEFLNIEDYEVPFIFNHRKDYLIHAPGDSDDQDDANLPPVNVRPER
LLNQSDLWEVFDLDLKFRAFAEKRDALRLNYDNIRSVYPEIIDTEIEDLSNKAITIEEIQ
ELQDYLHYRYSTEISEVRQETNGVQKRANNARSFYDKLRSGKAHQLVKAIGITAEDFAKA
AEGTSRGAQIIEDPPFQVQEYADQLAEAPETGTTLLRSAKILFVQDLNMSSRLRRFLRGS
FYQNAQIDCIRTDKGARKITEDHPYYEFKYLRRQTFMDLHGRPDLFLKMLKAESEGLVQV
QISMSNYTDFKKRLQGKIVSDNVSEVSDSWNNLRRELLDEALDKLQKVIAAGVKESLRAR
CEDELASRARESYYNRLDQAPYKLKAAPLGSVPNALCMSNGQGQRGDAIMWAYVENDGRV
LEHGKFVDFRLGNQERGIADGQDIAKFVEAAQRRRPDVIGISGWSVETRKLYKDVQEIIQ
QNGLTGPTYEDENSGQERSDPLEVVLVNDEVARLYYNSGRAAAEFPKYAPLVRYCISLAR
YLQNPLAEYASLGKDIISIPFIPNQTLIPQEKLFDRLETAMVDMVNLVGIDLPESYDDKY
LGKLLPYVCGLGPRKADRLVKAIQANGDEILSRYDLLGVSENSSRDLKAAMGPKVHQNCA
SFLYIPYDATEESSDYLDYTRVHPEDYDLARKMVADALNMDEEDVKAETDEGGPSAVIRK
MVREETTDLVNDLALEDYAIEIQRNFGQRKRATLETIRAELENPYEEIRQTFALMSSDEI
FTMLTGETKETLYEHMVVPVTIKRTFPDHIECRLECGIEGGVSESEFPEGVGNGGQEPRH
VYQSHQVVRGRIMFLNIKALTAQLSLREDIIRKPQPQPDRIPGEWDDLQEAADKKAAEKE
KEVASGRPNRVVNHPLFFSFNSIQAEEYLGSKEVGELVIRPSSKGFDHLVVTWKVGNNAY
QHLDVLEMNKPNQFTLGKQLKIGKTTYTDLDELIVNHIEAMARKVSELTRDERFKTGTKE
ETEQWLENYCTANPNRSMYAFCSMPKYPGHFWLCFQLGHEKPKGAWPFKISPGKFEMRGH
AYGDMVSLKNGFKMLARVAGTGAAAGGAIPRR
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggccaacttctttgacactgctgccgaattgggcagcgaggaggaggacgag
gattttgatgaggagggcggtgaagttcgccccaaaaagacaaatggcgccaatggatta
gaggactcgagcgaggaggaagacgaggacgatgatgagcttctagcgcaggaaggcgca
ggctttgtcgtggacgaggatgaagaagacgaggaagctgagcgcaagcgacgccgcaag
aagaagcgcaagaatcgcgaggtcgacgaagctctcgacgatgaggacttggacttgatt
ggagttgaggtggagcgaccagatgagacacagtccagattcaaacgcctaaagcgaggc
cacaaagagcgcgcacgagcccgtggtatcgacgacatcttttctgacgacgaaccgaat
gatgacattgacgagccacgaagagctggtctgaacgagttcgacgacttcatcgaggac
gatcagttcgaggatgagattgaagacgaccgggatgtaacacaaccgggcatcaatctg
attacacaaggtctacaagctgctggactcgacgagggtgctgaagaagactacagggcc
gcgttcggagatggcacagattatgactgggcactggacatgcaagaggcagaagaggac
gagcaggccggtgaaggccgggaccttcagctcaaggatgtctttgagccatcgcagtta
caggagcgcctgttgacagacgacgacaacatcatccgcgagaccgacgtacccgaacgc
ctccaactggctcgcaagcccttcaaggacctggagctaacagatgaagatatgcaagag
cggttgaaggaggaagcacattggattacaacgcttttatggccaaagaaagggttggaa
ggttacttccatgcgccattcgagagggctgtccacaaggtcctcgagttcttgaacatc
gaagactacgaagttcccttcatcttcaaccaccggaaagactatcttatccatgccccg
ggtgacagcgacgaccaggacgacgcaaatttgcctccagtgaacgtccgaccggagcgc
ttgctgaatcagagcgatttgtgggaagtctttgacctggacctcaaattcagggctttt
gctgagaagcgggatgctctccgtctgaactacgacaacatccgaagtgtgtaccctgag
atcatcgacactgagatagaggatctctcgaacaaggcgatcaccatcgaagaaattcag
gagttgcaggactacctccactaccgctactctacggagatcagcgaagtacgacaggag
acaaacggagtgcagaaacgcgccaacaacgcgcggagcttttacgacaagttgcgcagt
ggcaaggcgcatcagcttgtcaaggctatcggcatcaccgcggaagactttgccaaggca
gccgaaggtactagtcggggcgcgcaaatcattgaggatccaccattccaggtacaagag
tacgccgatcagctggcagaagctcctgagactggtaccacattactcaggtcggctaaa
atcttgtttgtgcaagacttgaacatgagctctcggttacggaggttcttgcgtgggagc
ttctaccagaacgcacagatcgactgtatacgaacagacaagggcgcacgcaagatcacc
gaggaccatccatactacgagttcaaatacctgcgacgacagacatttatggatctacat
ggccgaccagatctctttttgaagatgctcaaggctgaaagtgaaggtctcgtccaggtc
cagatttccatgtctaattacacagacttcaagaagcggctccagggcaagattgtatcg
gacaatgtcagtgaggtctcagactcatggaacaatttgcgccgagagctacttgatgag
gccttggacaagctgcaaaaggtcattgcggctggtgtcaaggagtcgttgcgtgcgcgt
tgtgaggacgaactcgcgagccgagctagggagagctactacaacaggcttgaccaagca
ccatacaagctcaaggcagccccacttggctcggttccaaatgctctgtgcatgtcgaac
ggccaaggccaacgcggagatgccattatgtgggcatacgtggaaaacgatgggcgcgtg
ctagaacatggaaaattcgtggacttccgactgggcaaccaggagcgaggtattgcggat
ggtcaagacattgccaaattcgtcgaagcagcccaacgccgtcgtcctgacgtaatcggt
atcagtggctggtcagttgagacacgaaagctctacaaggacgtccaagagatcatccaa
cagaacggactgactggcccgacatatgaggacgagaatagcggccaggagagaagcgat
cctttggaagtcgtcttggtgaatgacgaagtggcccgactgtactacaacagcggccga
gcggctgccgagttccccaagtatgctccgcttgtccggtactgcatttcgcttgcacgg
tacttgcagaacccgttggctgaatatgcctccctcggaaaggacatcatttcgataccg
ttcattccgaaccagactctcatccctcaagagaagctgttcgataggcttgagacggcc
atggttgacatggtcaaccttgtcggtatcgatctacccgagtcttacgacgacaagtac
ctgggcaaacttctaccttacgtctgtggtcttggccctcgtaaggcagataggcttgtt
aaggctattcaagctaacggcgacgagatcctctctcgctatgatcttctgggtgtctct
gaaaacagttctcgcgacctgaaggcggctatgggccccaaggtgcatcagaactgtgcc
agtttcctctacattccttacgacgcgaccgaagagtcttcagactacctcgactacacc
cgtgttcaccccgaagactacgacctcgcccggaaaatggttgcagatgctttgaacatg
gacgaggaagatgtgaaggccgagacggatgaaggtggtcccagcgccgttattaggaag
atggttcgcgaggagaccaccgatctagtcaacgacttggctttggaggactacgctatc
gagattcaacggaatttcggtcagcgcaagcgtgcgacactcgagaccatccgtgctgag
ctggagaacccatacgaggagatcaggcagacgttcgctctcatgagcagtgacgagatc
ttcaccatgctcactggtgagaccaaggagactttgtatgagcacatggtcgtccccgta
acgatcaagcgcacgttcccagaccacatcgaatgtcgactcgagtgcggtattgagggt
ggcgtctccgaatccgaatttcctgaaggtgtcggtaatggcggacaagagcctcgccac
gtataccagtcgcaccaagtggtgcgcggtcgcatcatgttcctcaacatcaaggctctc
acagcacagctgtcattacgagaggacatcatccgcaagccccaaccacagcccgaccgc
attcccggcgaatgggacgacttacaagaagcagcggacaagaaggcagctgagaaggag
aaggaagtcgcttccggtcgccccaaccgtgttgtcaaccacccactcttcttctccttc
aactctatacaggcagaggagtatctcggtagtaaagaggttggcgagctcgtcattcgg
ccatcgtcgaagggtttcgatcacttggtcgtgacctggaaggtcggcaacaacgcctat
caacatctcgacgtcctggagatgaacaagcccaaccaattcactctcggcaagcagctt
aagatcggaaagacgacatacaccgatcttgacgagttgatcgtcaaccatatcgaagcc
atggcgcgcaaggtctcggaactcacgcgagacgagcgcttcaagactggcaccaaggag
gagactgaacaatggctggaaaactactgcaccgccaatcccaaccgctccatgtacgcc
ttctgcagcatgcccaagtaccccggccacttctggctgtgcttccagctcgggcacgag
aagcccaagggcgcatggccatttaagatcagccctggaaaatttgagatgcgcggtcat
gcatatggtgatatggtgtcccttaagaacgggttcaagatgttggcgagggtcgcgggg
actggtgctgctgctgggggtgcgatcccgaggagatga
DBGET
integrated database retrieval system