Parastagonospora nodorum: SNOG_06135
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Entry
SNOG_06135 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pno
Parastagonospora nodorum
Pathway
pno03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SNOG_06135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pno03000
]
SNOG_06135
03021 Transcription machinery [BR:
pno03021
]
SNOG_06135
Transcription factors [BR:
pno03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
SNOG_06135
Transcription machinery [BR:
pno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SNOG_06135
RNA polymerase III system
TFIIIB
SNOG_06135
RNA polymerase I system
SL1/TIF-1B
SNOG_06135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF4295
FlgE_D2
Motif
Other DBs
NCBI-GeneID:
5973398
NCBI-ProteinID:
XP_001796519
UniProt:
Q0UQ29
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MDPNSLNSHPSTAAQAKTFVAPGSLSFPNQGDLTPPSSEKNAQQEATNANGVATPAATPD
TQNGQVPSGIVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTA
LVFASGKMVVTGAKSEDDSRLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLE
GLASRHHTFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPV
LSDFRKS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaactccctaaactctcatccgtccaccgccgcccaggccaagacgttcgtg
gctccgggctccctctcgtttcccaaccaaggggacctgactccaccgtcctctgagaag
aacgcgcagcaggaggccaccaacgcgaacggcgttgcgactcctgcggctactccagac
acccagaatggccaagtgccctcgggtatcgtgcctactcttcagaacattgtggcaacc
gtcaacctctccgctcgccttgacctgaagaccatcgctctgcatgcgcgtaacgccgag
tacaacccgaagcgtttcgctgccgtcatcatgcgtatccgtgagcccaagacgacggct
ctggtctttgcgagtggcaagatggttgttactggtgccaagtctgaggacgatagccgc
ctcgcttcccgcaaatatgcgcggattatccagaagctggggttcaacgcaaagttcacc
gacttcaagatccagaacattgttggctcctgcgacatcaagttccccattcgcttggag
ggtcttgcatcgcgccatcacactttctcgtcttacgagcctgaactgttccctggtctc
atctaccgcatgatgaagcccaagattgtcctgctcatcttcgtcagcggcaagattgtc
cttactggtgccaaggtccgtgaagagatctaccaggctttcgagctcatctaccccgtc
ttgtcggatttccgcaagtcatag
DBGET
integrated database retrieval system