Parastagonospora nodorum: SNOG_06187
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Entry
SNOG_06187 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pno
Parastagonospora nodorum
Pathway
pno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SNOG_06187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_06187
DNA repair and recombination proteins [BR:
pno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
SNOG_06187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
5973448
NCBI-ProteinID:
XP_001796569
UniProt:
A0A7U2I3T9
Q0UPX7
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MARARGRLRKAAETATPRRSTRRGRASQQDEDVPAIFQEMLLEEEAAAKATSTDEDERPV
KKRKTARSQTSSSPVVKPSHVKATVVKGTEPAPSIRSRKDASLEPETPLYSLTHPPATAG
SMPPDVAPSSGRILQTVIDSDESDDSDEEWEDALADGDEADEHEETESVIPQVAGISITL
GANKDAEPAPKRRIRRRAITSVDKKKRLDIHKMHVLCLLYHVYRRNAWCNDLRVQSALRK
LVPPKTLQNLVPNPDLTQYSASKRFIDGMNELKVLWNKRFKLTAQGMYKPKWAEADAHVR
PFSDFDELDDPMDKDDFRRTAHTLQGSQDVGTQLFCALLRAIGVEARLVCSLQPLPFASS
AQPSTPQKTTSQKNTIVLDPYNKQEAASSSKSRAVTPSRPRKLSRMERVMGERHAVLNKT
GVALQRQKAYHTPYPVYWVEVFNTAHQKWVAIDTHSTFTVNSPEKLEPPLSHAQNSLTYA
IAYEEDYTAKDVTRRYAKAYNAKTRKFRIECTPNGAEWWRKAMKFFKRMVPLDRDQVEDA
ALARKEASEGIPKNVQDFKNHPVYVLERHLKHNEVIHPMDPIGKINVGTGMNPKMESIYR
RNNVHTVRSADKWYRMGQDVKDGEQPLKHAKPKRGRQMSVNLDMDVDDQQEEIGAGLYAK
FQTRLYVPPPVVKGRVPRNVYGNLDLYVPSMCPPGGTHIRHKIASKAARIVGVDYADAVT
GFSFKGRHGTAIVQGVVVASEYAEAVQEVIDGMIYQQEEAANAARSRESLRLWRRFFLGL
RIAQRVNAMEIDGEKGPSMDVDVQQEIDREDEQMVEGEMAGGFFPDEADFAQPPRVERAY
EPPQQEYGGGGFMADDDEDEGGGFIPERDDDDDAVKAPISMNREHSFESSILDSHQLRPR
RRSSFADDFVLEEEEDEEGSAGSTRDQSDAEPANDDENAETHIAQDEAAVDGGGGFLPED
ADADVNMVDQPPQEASPVPRDPGTEDAEMPPESSPSDTGSLPLEDPEDEDADPDWLVDAT
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcgcgcggcaggctccgcaaagcagctgagaccgccactcctagacgatcg
acacgtagaggcagggcctcacagcaagatgaagacgtaccagctattttccaggagatg
ctactcgaggaggaggccgctgccaaggccaccagtacagacgaggatgaacgtccagtt
aagaagaggaagacggcgcgttctcaaacaagttcaagccctgtcgtaaagccttcgcat
gtgaaagctacggttgtgaaagggaccgaacctgcaccgtccataagatcgcgcaaagat
gcttcgctcgaaccagagacaccattgtacagtcttacacatccgcctgccaccgcaggg
tccatgccgcccgatgtcgcgccttccagcggtcgcatactacaaaccgtgatagactcc
gacgagtcagatgacagcgatgaggagtgggaagacgccctcgcagatggagacgaggcg
gacgaacatgaagagactgaatcagtcatacctcaggtcgctggcatctccatcacgctc
ggagcgaacaaggatgcagaacctgctcccaagagaagaatccgcagacgagccatcaca
tctgtagacaagaagaagcggctggacattcataagatgcacgttctatgtttgctctat
cacgtttatcgtaggaatgcatggtgcaacgacttgcgggtgcagtccgcgctgcgaaag
ctggtaccacccaagacattgcagaatctcgtcccaaatcccgatctcacacaatactct
gcttcgaagcgcttcattgatggaatgaacgagctcaaggttctgtggaacaagcgcttc
aaacttactgctcagggcatgtacaagccaaaatgggcagaggcagatgcccatgtccga
ccattctctgatttcgatgaacttgatgaccccatggacaaggacgattttcgcagaacg
gcgcataccttgcagggctcgcaagatgttggcactcaacttttctgtgccctgcttcgt
gccatcggtgtcgaagccagactcgtgtgttccttgcagccactgccattcgcctcgtct
gctcagccttctaccccgcagaagacaacttcgcagaagaataccatagttctggatcca
tataataagcaagaagctgcctcgtctagcaagtccagggctgtcacaccatctcggccc
aggaagctctcgcgcatggaaagggtcatgggcgaacgacacgccgtcctcaacaagacg
ggcgtagctttgcaaagacagaaggcgtaccatacaccatatccggtatattgggtggag
gtgttcaacactgcgcaccagaagtgggttgctatagacactcattcgacgttcacggtg
aactcgcccgagaagctcgaaccaccactcagtcatgcgcaaaatagtctcacatacgcc
atcgcctatgaagaagactacacggcaaaagacgttacacgacgttatgccaaggcatat
aatgcaaagacgcgcaaatttcgtattgaatgtacacccaatggggcagagtggtggcgg
aaagcaatgaagttcttcaaacggatggtccctctcgatagggaccaggtcgaagatgca
gcacttgcccgcaaagaggcatctgagggcattcctaagaacgtgcaagacttcaagaac
caccctgtatatgtgcttgaaaggcatctgaagcacaacgaagtcatacaccccatggat
ccaatcggtaagatcaacgtgggtacaggcatgaaccccaaaatggagtccatctatcgt
cgaaacaatgtacacactgttcgaagcgcagacaagtggtaccgtatgggccaggacgtc
aaggatggcgaacagccgttgaaacacgccaagccaaagagaggcagacagatgtcagtc
aatcttgacatggatgtcgatgaccagcaagaagaaattggtgctggactatacgccaaa
ttccagactcgactctacgtcccaccacctgtggtgaaaggccgtgttcctcgcaatgta
tatggcaatctggatctctatgtcccatccatgtgcccaccaggcggaacacacatccgg
cacaaaatcgcttcgaaagcagcacgcatcgttggtgtcgactatgcagacgcagtgact
ggtttctccttcaaaggtcgacacggcactgcgattgtgcaaggtgtggtggtagcgtca
gagtacgctgaagcagtgcaggaggtcattgatggcatgatctaccaacaagaagaagcc
gcgaacgctgcacgcagtcgggagtcattgcgtctctggcggaggttcttccttggctta
cgcattgcccaaagggtcaatgcaatggagattgatggcgaaaaaggcccgtcgatggat
gtggatgtgcagcaagaaattgatcgcgaggacgagcagatggtcgagggagaaatggct
ggtggtttctttccggacgaagctgactttgcgcaacccccgcgagttgagcgtgcgtat
gagccgccacagcaagaatacggagggggcggcttcatggctgatgatgacgaggatgaa
gggggagggttcataccagagagggacgatgacgacgacgctgtgaaagctcccatcagc
atgaatcgcgagcacagttttgaaagctcgatcttggactctcatcagcttcgcccgcgg
cgcaggagtagtttcgcagacgactttgtattggaagaggaggaggatgaggaaggaagt
gctgggtctacacgcgaccaatctgacgctgagcctgccaatgacgacgagaatgccgaa
acccacatcgcccaggatgaagccgctgtagatggaggcggggggttcctaccagaagat
gcagacgcagacgtgaatatggtcgaccagcctccacaggaagcgagcccagttccaagg
gacccaggcactgaggacgccgagatgccaccagaatcctctccatcagacaccgggtcg
ctcccgctcgaagatccagaagacgaagatgctgatcctgactggctcgtcgatgccaca
tag
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integrated database retrieval system