Parastagonospora nodorum: SNOG_06451
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Entry
SNOG_06451 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_06451
03036 Chromosome and associated proteins [BR:
pno03036
]
SNOG_06451
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
SNOG_06451
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SNOG_06451
Chromosome and associated proteins [BR:
pno03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
SNOG_06451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
ResIII
AAA_30
UvrD-helicase
Helicase_RecD
DEAD
UvrD_C
AAA_22
AAA_16
T2SSE
SLFN-g3_helicase
AAA
PhoH
Motif
Other DBs
NCBI-GeneID:
5973701
NCBI-ProteinID:
XP_001796822
UniProt:
Q0UP63
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MGVNVLFPLKQSKIDTQQRTLRFIASQLDMVDPSQMHTQQSVADGDFDDFNDVAAKSNAS
SKATGQGKETMQNTWIQRMLFPTEAHGEMQTELRRIPHRALFDHAINYEQAHAVSSICTR
DYGTLPYLISGPPGTGKTKTLVETAMQLFNTSEAPHTLICAPSEAAADTLALRLKKYLSN
EQLFRLIRPGRNDTEVPGELTQYCYMTYDMFSLPPIKTMMAYNIVVTSCQDAGILFDARL
TNDDLWHIERNMLATFHPEDQVATPRLHWGALLIDEAAQATEIDLLAAISVACPPSSYPT
DLPQPLFIMAGDENQLGPKTASRDPHFSKSLFARLRERPLYKNHPLSRSSVKPSAAPPVL
KKNMLPIIYPPFTNLIRNYRSHPAILSVPSSLFYNDTLIPESPPPNTPLQTSPLWRGRKW
PVLFVPNTAPDEIERDGGGWYNIAEAHIACSIAQQLIRDSGVAQKDICIMSPFAAQVKLL
RSRIRSQQYGLWEVNIGPLEAFQGLEKRVVIVCTTRTRARFLAEDERRGLGIVQQKRKMN
VALTRAKEALFVVGNPGILVRDECWKTWLAFCWRNGLVDDRGEGWDGDAERVWGGECWGI
GEGVGGEGR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcaacgtattgttccccctgaagcaatcgaagatcgacactcaacagagaact
ttacggttcattgcatctcagctcgacatggtagacccttcacaaatgcacacccaacaa
tcggttgctgatggcgactttgatgacttcaacgacgtggccgcaaagagcaatgcgtca
tccaaagctaccgggcaaggcaaagaaacgatgcaaaatacatggatacagcgaatgctt
ttcccaacagaagcacacggcgaaatgcagactgaacttcgcaggataccacatcgtgca
ctcttcgatcatgctatcaattacgagcaagcacatgcagtgagctcaatctgcaccagg
gattatggtacactaccgtacctgatcagtggaccaccaggaactgggaagacgaaaact
ttggtcgagaccgccatgcagctattcaacacgtcggaagccccgcacacgctcatatgt
gcgccttcagaggcagcagcggatacccttgcactgcgattgaagaaatatctcagcaat
gagcagctatttcgacttatacgaccaggaagaaatgacactgaagttcctggagagctc
acacaatactgctacatgacatatgacatgttctcgctcccacctatcaaaacaatgatg
gcatacaacatcgtcgttacttcatgtcaagatgctgggatccttttcgatgcgcgcttg
accaacgatgatctttggcatatcgaaagaaacatgcttgcgacttttcatccagaagat
caagttgctacaccgaggctacactggggagctctacttatcgacgaggcagctcaagcc
acagaaatcgaccttcttgccgccatcagtgtcgcctgtccaccttcatcttacccaaca
gacctccctcaacccctcttcatcatggccggagacgaaaatcagctaggaccaaagaca
gcatctcgcgatcctcacttctccaaatccctcttcgcacgactcagagagcgaccacta
tacaaaaaccaccccttatcccgatcaagcgtcaagccatccgctgcaccacccgtcctc
aaaaaaaacatgctccccatcatctacccgcccttcacaaaccttatccgcaactaccgc
tcccaccccgccattctcagcgtccccagctcgctcttctacaacgacaccctcatcccc
gaatcgcccccacccaataccccactgcaaacctcgcccctctggcgcggccgcaaatgg
cctgtcctcttcgtccccaacaccgcgcccgacgaaatcgagcgtgacggcggcggctgg
tacaacatcgccgaagcccacatcgcatgcagcatcgcccagcaactcatccgcgactcg
ggcgtcgcgcagaaagacatatgcataatgtcgccgttcgccgcacaggtcaagctgctg
cgctcgcgcatccgctcgcagcagtacgggctgtgggaagtgaatatcgggccgctggaa
gcgttccaggggctggagaagcgcgtggtcatcgtctgtacgacgcgcacgcgcgcccgg
tttctggcggaggatgagaggcgcgggttgggcattgtgcagcagaagaggaagatgaac
gtggcgctgacgcgcgcgaaggaggcgttgtttgtggttgggaatccggggattctggtg
cgcgatgagtgttggaagacgtggttagcgttttgctggaggaatgggttggtggatgat
cgtggggagggatgggatggtgacgcggaaagggtttggggaggggaatgttggggtatt
ggagagggcgttggtggcgaaggaagatag
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integrated database retrieval system
