Parastagonospora nodorum: SNOG_06469
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Entry
SNOG_06469 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pno03009
]
SNOG_06469
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SNOG_06469
Ribosome biogenesis [BR:
pno03009
]
Eukaryotic type
Pre-60S particles
Helicases
SNOG_06469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
5973718
NCBI-ProteinID:
XP_001796839
UniProt:
Q0UP45
A0A7U2F5K0
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MAPQTKIDRSFSALTPALSEWIIDAVDAMGFVKTTPVQHAAIPMFMKNSDVVVEAVTGSG
KTLAFLIPIVERLLREDAPTKKHHVGAIIISPTRELATQIHTVLSSLLKFHAPSAAMLEP
DDEDTDMEDADTPPKPTFPPGTLKAVPQLLLGGSVTPAQDLSAFLKKSPNILIGTPGRLL
ELLRSPHVHCPQSSFDALVMDEADRLLDLGFKEDLQKIISRLPKQRRTGLFSASMSEAVD
QLIRVGLRNPVRIAVKVKARATGEDGKIEDKRTPASLQMSYLVTPPSHKIPAMKKILSSL
QPQPQKSILYLSTCFSVDYFQHVLPEVLQGYDIVPLHGKHPDKVRRKNFNKFVDSVTPSI
LLTTDVAARGLDIPSVDLVFQLDPPSDPKTFIHRCGRAGRAGRRGLAVTFLNPGREEDYI
EFLQVRQTPISPLTTPEITVTDEDAKAVTSKIRKKVREDRALFDKAQRGFVSWVRAYSKH
TASSIFRIDDLDWTELGNAWGLLTLPGMPELKKWQGDKRLGIELDLATYAYKDKAREKLR
LEELERDKEEGTKKKQHKKEDREKSAWTEQKESKATKEVRREKKKSKREHERLAKMTDEE
RKEEDRVQAMIEQMRKKVAKQEAEDADFEGFSD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacaaacgaagatcgatcgctcgttcagcgccttgacgcctgcgctgtcagaa
tggatcatcgacgccgtggatgctatgggttttgtgaagaccacgcctgtgcagcatgca
gctatccccatgttcatgaaaaactccgatgttgttgtagaagccgtgactgggagtggg
aaaacacttgcgtttttgatacccattgtagagcgactgctgcgcgaggatgcgcccacg
aagaagcatcacgtgggcgccatcatcatctcaccaacccgggaactagcaacacagata
cacacagttttatcgtcgctcctaaagtttcatgccccatcggcagcgatgcttgagcct
gacgatgaggacacggacatggaagacgcggatactccaccaaaaccaacattcccacct
ggaacactcaaagccgttcctcaactacttcttggcggatctgtcactcctgctcaagat
ctcagtgcgttcctgaagaagtcgccaaatatcttgattggtacccctgggaggctcctg
gaattgcttcgttcgcctcatgtacactgcccacagtcatcatttgatgcgttagtcatg
gatgaagcagatcgactactggatttaggtttcaaggaagaccttcaaaagatcatttct
cgtcttcctaaacagagaagaacgggactgtttagtgccagtatgagtgaggctgtcgat
caactcatccgtgttggtcttcgtaatcctgtccgtattgctgtcaaggtcaaagcacga
gctactggcgaagatggcaagatcgaggacaagcggacaccagccagtttgcagatgtcg
tacctcgttacacctccatcacacaaaataccagccatgaagaagatcctgtcatcgctg
caaccgcaacctcaaaagtcgatcctgtatctttcaacttgcttttctgtcgattacttc
cagcatgttttaccagaggttctgcaaggctatgacatcgtaccgttgcacggaaagcac
cccgacaaagtgcggcgcaagaatttcaacaaatttgttgatagcgtcaccccttcaata
ctgttgaccaccgatgtggccgcccgtggactcgacatcccctccgtagatcttgttttc
cagctcgaccccccaagtgatcccaagacgttcatccatcgatgtggtcgcgctggaaga
gctggtcgcagaggcttagctgttacattcctcaaccccggacgagaagaagattacatt
gagtttctgcaagttcgccagactccaatatcgcctctaactacacccgaaatcacagta
acggacgaagatgcgaaggccgtgacgtcgaagatcagaaagaaagttcgagaagatcga
gctctttttgacaaagctcaacgtggctttgtgtcctgggtccgtgcatacagcaagcac
actgccagctcgatatttcgcatagatgatcttgactggaccgagctaggcaacgcatgg
ggtttgctcacactgcccggtatgccagagttgaagaagtggcaaggcgacaaaagactt
ggaattgagctggaccttgcaacatacgcatacaaagacaaggcgcgcgaaaagctgcga
ttagaagagctcgaacgagacaaggaggaaggtacgaagaagaagcagcacaagaaggag
gatagggaaaagtctgcgtggacggaacaaaaggagagcaaagcgacgaaggaggtacgc
agggaaaagaagaagtcaaagcgggagcatgagcgcctggcgaagatgacagacgaagag
aggaaggaagaggacagggtacaagccatgattgagcagatgcgcaagaaggttgcaaaa
caggaagctgaagatgctgactttgagggattcagcgactaa
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