Parastagonospora nodorum: SNOG_06594
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Entry
SNOG_06594 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
pno
Parastagonospora nodorum
Pathway
pno03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SNOG_06594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_06594
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SNOG_06594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF3450
Uds1
CENP-F_leu_zip
End3
TolA_bind_tri
DUF7310
Motif
Other DBs
NCBI-GeneID:
5973840
NCBI-ProteinID:
XP_001796961
UniProt:
Q0UNS0
LinkDB
All DBs
Position
Unknown
AA seq
2238 aa
AA seq
DB search
MATAAVDVGYLAASYSVPETTIQSLLSEPTVDLVQSLLVQIEAKAREFEDLQSEKLKADV
ELDNAVQSGEQRARALKAAADKAQKETEELRQKAAQEGARLAETARKQLEAQLHDIQTST
ATSSSQVDVLESRIRTLESQNRDTLATYETKATAYDRLAKELSEQHQKYVDLRKSLSALE
EKNQSLESAANNVKFRETNLHQEIELLRKNTDWYETELKTRSSDNTKFRKEKNAQVAELQ
RANADAAETIDSLQRTETLLRKHFDELKAKAEEDRTRIQQLEDDAANNEANFRSELENVN
RLAAMHKKTADMAKKRLEEIQADLSRLEESAAEEVGQLQAEVEIERNRATEAEASVANLE
SLVENLEREANQFKHSVHAPATPRRPTNGAYGTPGRAGSPAVFSPGGSQLKGLTNTKILA
ENATLKEQLRDARDDNEQKTAMIRSMVDEMERLDPAVDELRRTNETLTTQITDMASDLEA
AVAEKDAARKEERKARGDLEGTRRECSQLQIHVQDLTVQLRSLMWRQQAAEQGLATLTAD
QQQFVLNSENNELPETERYGETATDNIISQHLVLYKNISDLQKQNAELLRMIREVAQQHE
GTEARSQEAQVKKDQEELITLRTRVVEFEDQLKSLQIRTQSYKKERDMYRQVATSRNLPL
PESDGASAFGQSFNSQAPMTPLRGLGGSLFNDQTPRAGDVNGVEKTQVDTLKEESATDRA
TLKSQVETLSKDNNQLQSEKIRLDSQIRREQDHYARLESTVKMLESEKNTLQERYYSIQT
TLAKQDDKVVRAEQEAVDAVARMESLEHELVNLKASQSMWQTIEARLTERNQELMDERDR
LSKMVTDVQSLRNEQELANAENRRRLQDRVDALEGELQIAQRKLEDEVAEHKKASLQRDY
ERSEAQKRIEDLMKARNEADVRCAAADAARQQLEQRTNELRTQLQAAEDRVQALQPIPTP
RAAAAQDTEESTREEELVAQVADLQRKLDRKQEDLDAATAQIEGFQNIAQEAEEALQNAI
ETRDDLQTELDRVQEEKDAIIADLQRRVDDISSEFTTTNSELTELRGRHEQETMRLSQEK
EALDAEIINLKNDVNDYKAEAERQTQYVKSQAEIATRARQDYEHELAKHGDTMNSLRTLR
EEYNSIKSEVSQFKTQAEAARTALEQNEENWKSTQVRYENQLIEAKRNYDDLKQHNKTLL
EQFDNYKAQINDLKSNRAAATGDSAGEAAGSNKIDEITTFLKQEKDILEAQLSVKDSEAK
RLNSELTHVQSQLDQTREKLHAEQSRARGSLGGTNLQALQNQIEQLNVFRESNTTLRNDA
ARLEAKLAEKNKEFETLHGELEPLKARVEELEGELELTSGYLEQEKKQRDYWEKRFDKFV
NKSEHIDPKEMDDLKKTVEEIKAERDQYAEQISGLNEHATGLQEKIKTLEGGVEAAVKAA
NEAQKEELRGKFNKRHKQLMEAAMETKKSEIDALTVERDQLQTTLTTVQQELETSRQQLA
DAQGQATQSQEQVATMQQQVTQLQAQVATVQQELVATKSARDEATARTNAGVKSTADVDM
GEEGQVDESGAQGSDQRLAELQQKLEEVKAQLAEAQNRAFSAENDYSALKVKESFMRDQV
TKLEKDDADKANRIVELQEQLTSAQNQAAQSGSAGAVDAPPANPPSTEELDTLREQLSEA
RKALEDARANTQSVTVTASNPSNDVTADAAQGDAENVTLKAELDERENKLQEAEAALSQR
EVKVTTREGKVTEIQKKAQDKIHSIRSESNDKIAAVTKEMNEEIERLKTEIAGLQAEINR
LKETQQQPTGSNNATVVYKNLLDEEMPALVEVNTEGLTRPTVTAQELKLWINTNPAARGV
IIEQIKKHIDPLKEQLKTKEAELAQLNAQLKDAAQKPTETIKSEPSQVQSSGQDVEAALT
KAKVEHQQALEKAVKMVEMRNNIKTGMLQAGKDRWTAVEKISKESPTMEVSKAVIAAVEE
AKKPKPSATTPAQQPPTSSVAGLPLPAAAPNQSPAQPIAANNLQANGTSAPFQQPNFANQ
SLQNSAANPFMAAQQGRGIAQPGFTGQNPFVAPQQQQQQQQQGGRGRGENVGTGPRALQG
LFGNNQSSIPRGGASNIPLPGGRGRGGQPQQQQQQQQLQQNQNQQPTNNAQGPGASQIGR
GGARGGRGGGARGGAQSNQGSPRNSLNPGAAPFQALPTPGMGRGHKRSAEDEGEGGARGG
KRARGRGGQGGGGAPQGE
NT seq
6717 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcagctgttgacgttggctaccttgccgcgtcctattccgtcccggaaaca
accatccagtccttactatcagaacccaccgtcgacctcgtccaatcgctgctcgtgcaa
atcgaagcaaaagcgcgcgagttcgaggacctccaatccgaaaagctcaaggccgacgtc
gagcttgacaatgccgtccagagcggagagcagcgcgcgcgcgcgctgaaggctgccgca
gacaaggcgcagaaggaaacagaagagctgcggcagaaggccgcccaggaaggtgcgaga
cttgcagagacggcgcgaaagcagctagaggcccagctgcacgacatccagacgagcacc
gcaacctcgtcatcccaagttgacgtgctagagtcgcgcattaggacactcgagtcccag
aaccgcgacacgcttgcgacatacgagacaaaggccaccgcctacgaccgccttgccaag
gagctgtccgagcagcaccagaaatacgtcgacctgcgcaagtccctttccgccttggaa
gagaagaaccagtcgctcgagagcgccgccaataatgtcaagttccgcgagaccaacctg
catcaggagattgagctcctccgcaagaacaccgactggtacgagaccgagctcaagacg
cgtagcagcgacaacaccaagttccgaaaggagaagaacgcccaggtcgccgaactccag
cgcgccaacgccgacgccgccgagaccatcgactcactgcaacgaaccgagacactgctg
cgcaagcacttcgacgagctaaaggccaaggcagaggaagatcgcacgcgcatccaacag
cttgaggacgatgctgcgaacaacgaggccaacttccgcagcgagctcgaaaacgtcaat
cgacttgcggccatgcacaagaagacggcggacatggccaagaaacgattggaggagatt
caagctgatttgagccggctggaagagagtgctgcagaagaagtcgggcagttgcaggct
gaagtggaaatcgaacgcaaccgcgccactgaggcagaggccagtgtcgccaacctggag
tccctcgtcgagaacctggagcgcgaagccaaccagttcaagcactctgtgcatgcacct
gccacaccacgacggcccacgaatggcgcatatggcacacccggccgcgcaggttcccct
gctgtcttctcaccgggcggctcacagctgaagggcctcaccaataccaagattcttgcc
gagaatgcgaccctcaaggagcagctgcgcgacgctcgcgatgataatgaacagaagacg
gctatgatacggagcatggttgacgagatggagcgcctggaccccgctgttgacgagctt
cgccgcacaaacgagaccctcacaacgcagatcaccgacatggcgagcgatcttgaggct
gctgtggcagagaaagacgcggcgcggaaggaagagcgcaaagctcgtggcgacttggag
ggcacccgacgcgaatgctcgcagctgcagatccacgtgcaggatctcaccgtgcagctc
cgatctctcatgtggcgacaacaagcagcagagcagggcctcgcaacccttactgccgac
cagcaacagttcgttctcaactccgaaaacaacgagcttcccgagacagaacgttacggc
gagacagcgactgacaacatcatctcgcaacatcttgtgctgtacaagaacatttcggac
cttcaaaagcaaaacgccgagctcttacgcatgatccgcgaggtggcccagcaacatgaa
ggcacagaagctcgaagccaggaagcacaagtcaagaaggaccaggaggaactcatcaca
ctacgaactcgcgtcgtggaatttgaggatcagctcaagtcgctgcagatccgcacgcag
agctacaagaaggagcgagacatgtaccgtcaagtagccaccagtcgaaaccttccgctg
ccggagtcggacggagcatctgcttttggtcaatctttcaacagccaggcgccaatgaca
cccctgcgcggccttggaggttcgctattcaacgaccagacaccgcgcgctggcgacgtg
aatggagtcgaaaaaacccaggtagacaccctcaaggaagaaagtgccaccgatcgtgcg
acgctgaagtctcaagtggagactctttccaaggacaacaaccagttacagagcgaaaag
atccgactagacagccaaatcagacgggagcaggaccactacgctcgtctcgagagcaca
gtcaagatgctagaatcggagaagaatactctgcaggagcgttactacagcattcaaaca
acgctggctaaacaagatgacaaggttgtccgagcagagcaagaagccgtggatgccgtt
gctcgtatggagagcctggaacatgagcttgtgaacctcaaagcctcgcagtcgatgtgg
cagaccattgaggcacgcttgacggagcgtaaccaggagctgatggatgagcgtgaccgc
ctgagcaaaatggtgacggacgtccaaagcctgcgaaacgagcaagagctggctaatgcc
gagaaccggcgccggctccaggaccgtgtcgatgctttagagggcgaattgcagatcgcg
cagcgcaagctggaggatgaagttgccgagcacaagaaggcgtccttacagcgcgactat
gagcgcagtgaagctcaaaagcggatcgaagaccttatgaaagccaggaatgaggccgat
gtgcgatgtgctgccgcagatgctgcccgccaacaacttgagcagcggaccaacgaactg
cggacccagcttcaagctgctgaagatcgtgttcaggctctgcagccaattccaacacct
cgagctgccgcagctcaggataccgaagagtcgactcgtgaggaagagcttgttgctcaa
gtggctgaccttcagcgcaaactggaccgcaagcaggaagacctcgatgccgccacggct
caaattgagggtttccagaacattgcgcaggaggccgaggaggctcttcaaaacgcgatc
gaaacacgagacgatctgcagaccgagttggaccgtgtgcaagaggagaaggatgcaatt
attgccgatcttcaacgcagagttgacgacatctcatcagagttcacaactaccaactct
gaacttactgagctccgaggccgccacgagcaggagactatgcgcctgagccaagaaaag
gaggcactcgacgcagagatcattaatctcaagaacgacgtaaacgactacaaggcagag
gccgagaggcagacgcagtacgtcaaatctcaggctgaaattgcgacacgcgctcgacag
gactacgagcatgagcttgccaagcatggtgacaccatgaattcgttgcgcacgctcaga
gaagagtacaacagcatcaagtctgaagtctcgcaattcaagactcaggctgaggctgct
cgcactgcccttgagcaaaacgaagagaactggaagtcgacccaggtccgatatgagaac
caacttattgaggcgaaacgcaactacgacgatctgaagcagcacaacaagactctgcta
gaacaattcgacaactacaaggcacagatcaacgacttgaagagcaaccgtgcagcggct
actggcgactcagctggcgaggcagcaggttcaaacaagatagatgaaattaccactttc
ttgaagcaagagaaggacatcttggaggcgcaattgagcgtgaaggactcagaagccaag
cgcctaaattcagagcttacgcacgttcaaagccaactcgatcaaacgcgcgagaagttg
cacgccgagcagtcacgtgcccgaggctcgcttggtggaacgaaccttcaagctctccag
aaccagatcgagcaactcaacgtcttccgcgaaagcaacacgacgctgcggaacgacgct
gcgcgcctagaggccaagcttgccgagaagaacaaggagtttgaaactctccatggcgaa
cttgagcccctcaaagcacgcgtggaagagctcgaaggcgaacttgagcttacatcaggc
tatctggaacaagagaaaaagcagcgggactactgggaaaagcgctttgacaagtttgtc
aacaaatctgagcacattgatccaaaggaaatggacgacctcaagaagactgtcgaagag
atcaaggctgagcgcgatcagtatgccgaacaaatcagtggtctcaatgaacatgctacc
ggcctgcaagaaaagatcaagactcttgaaggcggcgtagaggccgctgtcaaggccgcc
aatgaagcacaaaaagaagaactcaggggcaagttcaacaagcgacacaagcagctgatg
gaggctgcgatggaaacgaagaagagcgagatcgatgctctcacagtcgagcgtgatcag
ctgcagacaacattgacgaccgtgcaacaggagcttgagacttcacgacagcaacttgcc
gatgcccaaggccaagctacccagtcccaagagcaggttgcgacgatgcagcagcaagtg
actcagttgcaggcacaagtggcgactgtccagcaagagctggtagctaccaagtctgct
cgcgatgaagctacagctcgtactaatgctggtgtcaaatcgactgcagacgtcgatatg
ggcgaagagggccaagtagacgaaagcggtgctcagggctcggaccaacgtctcgcagag
ctacaacaaaagcttgaggaagtcaaggcccagttggccgaggcgcagaacagggctttt
agcgcagagaacgattactccgccttgaaagtgaaggagtctttcatgcgagaccaggtc
acaaagctagagaaagacgatgctgacaaggccaaccgcatcgttgaacttcaagaacaa
ctcacctccgcacagaaccaagcagcccagtctggttctgccggtgccgtcgatgcacct
ccggctaaccctccttccaccgaagaactcgacactctccgggaacaactatcagaagca
cgcaaggctctcgaagatgcgcgcgccaatactcagagcgtgaccgttaccgcttcgaac
ccaagtaacgatgtcacggctgatgctgcacaaggcgatgcagagaacgtcaccctgaag
gcagagttagatgagcgcgagaacaaactgcaggaagctgaagctgctttgagtcagcgt
gaggtcaaggtcaccacccgcgagggcaaggtcaccgagattcagaaaaaagcccaagac
aagatacattcgatcaggagtgaatcgaacgacaaaatcgccgcggtcaccaaggaaatg
aacgaggagatcgagcgactcaagacggagatcgcagggttgcaggcagaaatcaacaga
ctcaaggagacacagcaacaacctaccggaagcaacaacgccactgtcgtctacaagaat
cttcttgatgaagagatgccagctttggtagaagtcaatacggaaggccttacacgccct
actgtaacagcgcaagagttgaaactctggatcaataccaacccagctgccagaggagtc
atcatagagcagatcaagaagcacatcgaccccctcaaagagcagctgaagaccaaagag
gcggagctggcgcagctgaatgcgcaattgaaagacgctgcacagaagccgaccgagact
atcaaatcggaaccgagccaggtacagagctcaggtcaggatgtcgaggctgcactcaca
aaagccaaggtagagcatcagcaagctctagagaaggcagtgaaaatggtcgagatgcga
aacaacatcaagaccggcatgctgcaggctggcaaggacaggtggaccgccgtcgagaag
atttcaaaagagtcacccacgatggaagtaagcaaggcggtcatcgcagcagtcgaggag
gcgaagaagccaaaaccttcagcaacaaccccggcacagcaaccaccgacgtcgtctgtc
gccgggctgccactacctgctgctgcaccaaaccaatcaccagcacagccgattgcagcg
aacaatcttcaagcaaatggaaccagcgcacccttccaacagccgaattttgctaatcag
tctttgcaaaattctgccgccaatcccttcatggctgcccaacagggacgcggtattgca
cagcctggctttactggccagaatccgttcgtcgctcctcaacaacagcagcaacagcag
cagcaaggtggtcgcggacgcggtgaaaacgtggggaccggacctcgcgcactccaagga
ctgtttggcaacaatcagtcgagcatcccacgtggcggcgcaagcaacattccccttcca
ggtggacgaggtcgtggtggtcagccacaacagcaacagcagcagcagcagcttcagcaa
aaccagaaccagcagcccaccaacaacgcccaaggtcctggagcttcgcagatcggacgc
ggtggtgcacgtggaggtcggggaggaggtgctcgcggcggtgcacagtcgaatcaaggc
agccctcgcaatagtctgaacccaggcgcggctccattccaagcactaccaacgccaggc
atgggacgtggccacaagcgcagcgctgaagacgagggcgaaggcggcgcgagaggcggg
aagagggctcgcggacgtggtggacaaggaggtggaggtgctccccaaggagaataa
DBGET
integrated database retrieval system