Parastagonospora nodorum: SNOG_06940 Help Entry SNOG_06940        CDS       T01161                                  Symbol SNOG_06939 Name (RefSeq) hypothetical protein   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism pno  Parastagonospora nodorum Pathway pno03030   DNA replication pno03410   Base excision repair pno03420   Nucleotide excision repair pno03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pno00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     SNOG_06940 (SNOG_06939)    03410 Base excision repair     SNOG_06940 (SNOG_06939)    03420 Nucleotide excision repair     SNOG_06940 (SNOG_06939)    03430 Mismatch repair     SNOG_06940 (SNOG_06939)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pno03032]     SNOG_06940 (SNOG_06939)    03400 DNA repair and recombination proteins [BR:pno03400]     SNOG_06940 (SNOG_06939) Enzymes [BR:pno01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      SNOG_06940 (SNOG_06939)     6.5.1.6  DNA ligase (ATP or NAD+)      SNOG_06940 (SNOG_06939)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      SNOG_06940 (SNOG_06939) DNA replication proteins [BR:pno03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     SNOG_06940 (SNOG_06939)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      SNOG_06940 (SNOG_06939) DNA repair and recombination proteins [BR:pno03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      SNOG_06940 (SNOG_06939)    NER (nucleotide excision repair)     Other NER factors      SNOG_06940 (SNOG_06939)    MMR (mismatch excision repair)     Other MMR factors      SNOG_06940 (SNOG_06939) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  5974190 NCBI-ProteinID:  XP_001797300 UniProt:  Q0UMS4 LinkDB All DBs Position Unknown AA seq 856 aa AA seqDB search MAPKQATLGKFFGNPNANTSKQQSKLSFSTKPKAQKIDAEIKDELESSTGDVKAEPASTA EEIEVKQETSGEAMELDSSSSETGKKRPAKEEEEEDSEDEPPMKRQRRKPSKDSEPSKKP KPAAKKSEKASVKSNKQPTKVKAAVLEDDDDEVATTALASKGKKITGKSPTPALPDYDGS AKEEEEETLSSDEEPEEMKKKAREKVQTALKSNTKDPYPDWKAGDPVPYAALCTTFSKIE MTTKRLEILAHCSLFLRQVLRLTPSDLLPTTLLMINKLAADYTGVELGIGESLIKKAISE STGRTLQHINSDHNEIGDLGLVAAKSRSKQPTMFKPKPLTIQGVHKGLLAIATIEGQGAQ GRKVDGIKKLLSAADSHNAGKHIDIEENKGGPSESKFIVRTLEGKLRLGLAERTVVVALA QAMIFHEMSQNGKTPSTTDLGTAESILKTVYSELPSYEVIIPAMLEHGILQLRENCRLQP GVPLKPMLAKPTKSITEVLDRFEGKDFTCEYKYDGERAQIHFVAHDADMEMATTAPSAGK SDRGVSNIFSRNSEDLSKKYPDILAKLPTWIKEGTKSFVLDCETVAWDMVEKKVLPFQQL MTRKKEGFKVCVFAFDILYLNGEALVNKSFRERREHLQDAFIPILLEDSVKASCEGLMVK MLDGPESSYEPSKRSQNWLKVKKDYLAGVGDSLDLVVLGAYFGKGKRTSWYGAFLLACYN PNTQNYESVCNIGTGFSEAILETLHEQLSEIVIDKPKPFYTHSVGNKDQPDVWFEPRYVW EVKTADLTLSPRYRAAADEVSGGGKGISLRFPRFIKERDDKKPDQASTSKMIAEMYQRQE SVSKTKGPSADDDFEY NT seq 2571 nt NT seq  +upstreamnt  +downstreamnt atggcgccgaaacaggctactttgggaaagttctttggaaacccgaacgcaaacacatcg aaacagcagtcgaagctgtctttttcgaccaaaccgaaggcccaaaagatagatgcagaa atcaaagatgagctggagtcatctaccggagatgtcaaagccgagcccgcatccacggca gaggagatagaagtcaagcaggagacaagcggcgaagcgatggaattagacagctcctcc tcagagactggaaagaagaggcctgcgaaggaagaagaagaagaagactcagaagatgag ccccccatgaagcgtcagcggagaaagccctcaaaagactccgaaccttcgaagaagccg aagccagcagcaaagaaatctgagaaggcgtctgtaaagtcgaacaaacaacctacgaaa gtcaaagcagcggtgctggaagacgacgacgacgaagttgctacaacagccttggccagc aaaggcaagaagatcactggaaagtcacctacgcctgcactaccagactacgacggcagt gcgaaggaagaagaagaagagacacttagctcagacgaggagccagaggagatgaagaaa aaagcgcgggaaaaggtgcagactgccctcaagtccaatacaaaggacccatatcctgac tggaaggctggggaccctgtaccgtacgccgcgctgtgcactaccttttcgaagatcgaa atgaccacgaaacgactggagatattggcacattgctcgctgtttctacgacaggtgttg cgtttgacaccatccgacctgctacccactactctactcatgatcaacaagctcgcggcc gactacacgggagtcgagcttggcattggggagtcactcatcaagaaagccatttcggag agtacaggtcgaaccctgcagcacatcaacagcgatcataacgagatcggtgaccttgga cttgtggcggccaagagtcgatcgaagcagccaacgatgttcaagcccaagcctctcact attcaaggcgtgcacaaaggcctgttggcgattgcgaccatcgaggggcagggtgcgcaa ggacgaaaagttgatggcatcaagaagctactttccgctgctgattctcacaatgctggt aagcatatcgatatagaagaaaacaagggtggtcctagcgaatcgaaattcatcgtgcgc acacttgagggtaagctcaggttgggccttgccgagaggaccgttgttgttgcgctcgct caggccatgatatttcacgaaatgtcgcaaaacggcaagacaccctcaacgactgacctg ggaacggccgagtcgatactcaagactgtgtacagtgagctcccaagttacgaagtcatc attccagcaatgttggagcatggcattctgcagctgcgtgaaaactgtcgactgcaaccc ggtgtaccactcaaacctatgcttgccaagccaacgaaatccatcacagaggttcttgac cgctttgaaggcaaagattttacatgcgagtacaagtacgacggagagcgagcccaaatc catttcgtcgcgcacgacgccgatatggaaatggcgacgacagctccgtccgccggaaag agcgaccgcggagtatccaacattttctctaggaactcggaggatttgtccaagaaatac ccagatattctcgcaaaactacccacttggatcaaagaaggcacaaagagctttgttttg gactgcgaaacagtggcctgggacatggtcgaaaagaaagtcctgccattccaacagctc atgacccgtaagaaggaaggattcaaggtctgcgtctttgcctttgacatactctacctc aacggtgaagcattggtcaacaagtctttccgtgagcgccgcgaacacctccaagatgca ttcattcctatattgcttgaagactcagtgaaagcgtcctgcgagggtctaatggtgaag atgcttgacggcccggaatcctcatatgagccatccaagcgatctcaaaactggctgaag gtcaagaaagactaccttgctggcgttggcgactcactcgatcttgtggttttgggagcg tacttcggcaaaggcaagagaaccagctggtacggagctttcttgctcgcgtgctacaat cctaacacacagaactacgagtcggtctgcaacatcggtactggcttttccgaagctatt ctcgagaccctacatgagcagttgtcggaaatcgtcattgacaagccaaagccgttctac acgcactccgtgggcaacaaggaccagcctgatgtatggtttgagccgcgctacgtgtgg gaagtcaagactgcagacctcactctatcaccaagatatcgggctgcagctgacgaggtc tctggtggcggcaagggtatcagtttacgttttccccgtttcatcaaggaaagggacgat aaaaagccagatcaggcgtccacatcgaagatgatcgcggagatgtatcaacggcaggag agcgtatccaagaccaaaggcccaagtgcggatgatgatttcgagtactag

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