Parastagonospora nodorum: SNOG_06952
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Entry
SNOG_06952 CDS
T01161
Symbol
SNOG_06950 SNOG_06951
Name
(RefSeq) hypothetical protein
KO
K03247
translation initiation factor 3 subunit H
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pno03012
]
SNOG_06952 (SNOG_06950 SNOG_06951)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pno04147
]
SNOG_06952 (SNOG_06950 SNOG_06951)
Translation factors [BR:
pno03012
]
Eukaryotic type
Initiation factors
eIF-3
SNOG_06952 (SNOG_06950 SNOG_06951)
Exosome [BR:
pno04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
SNOG_06952 (SNOG_06950 SNOG_06951)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF3h_C
RNase_H
JAB
Motif
Other DBs
NCBI-GeneID:
5974199
NCBI-ProteinID:
XP_001797309
UniProt:
Q0UMR2
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MDPSRYRQAYAAMLHTTQLIEERLNQDSESKEENAGQEVIPKAAFQEQDPDGMDWEPTES
KTPPVECGPPKPLSEKMRQFLPGAGEGDLRAEDRGENAVLLHKLKEGVIVDACIDKLVRD
LPDVMSHDDVLSFTPSTIEVPKDFGLQLSISINHHLAQVADQLIKKQAVTFSETIQDPVC
TLDNEIHNIFRVDNWHGCSDAIYEVLKPALRLATQFMTSRATAHFWQTLVFGKREACEDT
SKLYGQPCFRIRETVTWAEERQETFKNFLENQIDTVHFYFHHDPLPPETAYASMGLVKDY
KNGLMRKLNEKCHTSRICLHSDFYTTAKKLSLLQYPEPAMVLRFNFFLAICLAHEISHFC
EVSGPHHDHPLLSEPEVFFGDNMWTESGIAFELKVFGGRIHPLSSRIDCSFGLACLDYPL
KELYDKDDNILYALPMDYILKLQQKATWEQDFSGCGTDVFFVPRTGGRSYEINGTNLMIW
EDESDADISDHVDGQDTEWQRMDDGSIAKNPNSGNRRPQRQHAAHRWGPYNHKRKNTGEA
ESIVAKAEVENVDEVVKTAAGEQKQPVQAEAVELAEEIKVAVPDQDMRSPASMILWKDEC
SRPIPIDKLVIYNEAKKVSQLQMKVTKYPSPVVDPASLVVHIDGACRGNGTSSAKASYGV
YFGPESSHNTKGILPQSLPQTSTRAEIEALRQALDVICRVTDQDFTLTYIKIATDSSFLV
NAMSRWMDQWIENDDVGSNGQRVAHFEVLKELHDKLDYMEYSDEGGRHVQFWLIPRDLNG
EADPFPTKAIMADALKDVPFKTVQVDALVAIKIATASGKAFPSLATGSLVGMEKNGVLEI
TNSFPYPEINTASADGQNDTAANLSAAAPRAKQNIAYGNEMIKFLREVNVDANNVGWYTS
TSMGNFVNLNTIENQFYYQSQLNERTVALIYDVSRSSQGTLNLRAYRLSPSFVTAYKEGK
FTTESLQKSSLRYQDILVELPVTVHNSHLLTSLLHQLPSEAPKEELSFPPNLAALQQDPN
TPLPPLFPNYDALDLSIDPFLEKTCDLLLESIENHHTELNNYQYYQRQLAREQTKITAWQ
QKRKAENAARTASKQPLLPEDEWQRLFKLPAEPSRLETLLNSRQVEQYSRQVDGFAAGVT
SKMFAVKSNLLPGE
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggatccatctcgatatcgccaggcatatgcggcgatgctgcatacaacacagctaata
gaagagcgtttgaatcaggattctgaaagcaaggaggaaaatgcaggccaagaagtcata
cccaaagcggctttccaagagcaagaccctgatggtatggactgggaacctacagaatcg
aagactcccccagtcgaatgtggaccacctaagcctttgtccgaaaagatgcgccagttt
ctgcccggtgcaggagagggagacttgcgggctgaagatcgtggcgagaacgctgtactt
ctgcataagctcaaggaaggtgttatcgtggatgcttgtatagacaagctagttcgagac
ttacccgacgtcatgagccatgatgacgtgttgtcttttacaccttcaactattgaggtc
cccaaggatttcggtcttcagctcagcatttcgatcaaccatcatctagctcaagtggca
gatcagcttatcaagaagcaagcagttacattttcagaaaccattcaagatccagtgtgc
acgctcgacaacgagattcacaatatcttccgcgttgacaactggcatggctgttccgat
gcgatatacgaagtgctgaaacctgcattgcggctggctactcaattcatgacgtcccgc
gcaaccgcgcacttctggcagacactagtgttcggtaagcgcgaggcatgcgaagacacc
tcgaagctgtatggacagccatgtttccggattcgagaaactgttacctgggcagaagaa
cgtcaagagaccttcaaaaactttctggagaatcaaatcgacacagtacacttctacttc
caccacgaccctctgccaccggaaactgcatacgcatcgatgggcttagtcaaggactac
aagaatgggttgatgcggaaacttaatgagaaatgccacacaagtcgcatttgcctgcac
tccgatttctacacgactgcgaagaaactgagcttattgcaatatccggagcctgcgatg
gtcttgcgcttcaacttctttctcgccatttgtcttgcgcatgagatctctcatttctgc
gaggtatctgggccgcatcacgaccatccgttgctgtcagagccagaggtattcttcggg
gataacatgtggactgagagcggcattgcttttgagttgaaagtgttcggtgggcgcatc
catccactctccagccgtatcgactgcagctttgggctggcctgtctcgattatccattg
aaggagctttacgacaaggatgataacatcctgtatgctctgcccatggactatatcctg
aagctccagcaaaaggcgacttgggagcaggactttagcggatgtgggacggacgtcttc
ttcgtaccacgcacaggtgggcggtcatacgaaatcaacggtacgaatctcatgatttgg
gaagacgagagtgatgccgacatttccgaccacgtcgatgggcaagacaccgagtggcaa
cgcatggacgatggatcgattgcgaagaatccaaactccggtaaccgcaggccgcagcga
cagcatgcagctcatcgctggggtccatacaaccacaagcggaagaacacgggtgaagca
gagtctatcgttgccaaagcagaggtggagaacgttgacgaggttgtcaaaactgcagcg
ggagaacaaaagcagccggtacaggcagaggcggtggagcttgcagaggaaatcaaggtg
gcggtgccggatcaggatatgagatcgcccgcctctatgatcctatggaaagacgaatgc
tcaaggccaattcctatcgacaagctcgtcatttataacgaagcaaaaaaggtctcccag
ctacaaatgaaggtcacgaagtacccaagcccagtggttgacccggccagtctggtcgtc
catatcgatggggcgtgtcgtggcaacggcacctcctctgcaaaggcgtcttacggcgta
tacttcggccccgaatcctcacataataccaaggggatattgccacaaagtctgccgcaa
accagcaccagggcagaaattgaagctcttcgacaagccctcgatgttatctgccgggtt
accgaccaggattttacgctgacatacatcaagatcgccacagactctagcttcttggtc
aacgcgatgagtagatggatggaccagtggatcgagaacgatgatgttggctctaatgga
cagagggtggcgcactttgaagtcttgaaggagttgcacgataagttggactacatggaa
tatagtgatgaggggggcaggcatgtgcagttctggttaatcccacgagacctgaacggc
gaggcggatcccttcccgaccaaagcaatcatggcggacgctctcaaggatgtgccgttc
aagacggtccaagttgacgctctcgtcgcgatcaagattgctactgcgagtggtaaagcg
ttcccttcgcttgccactggtagcctggtcggcatggagaagaatggcgtcctcgaaatc
acaaactcgttcccctaccccgagatcaacaccgcgtcagccgatggtcagaacgacact
gctgcaaacctctctgcagcggccccgcgcgccaagcagaacatcgcatatggcaacgag
atgatcaagttcctccgggaagtgaacgtggacgcgaacaacgtcggctggtacacaagc
acaagcatgggcaactttgtcaacctcaacaccattgagaaccagttctactaccagagc
cagctcaacgagaggaccgttgcgttgatctacgatgtcagccggagttcgcagggcacc
ctgaacctgcgcgcataccgcttgtctccttcgtttgtcacagcgtataaggagggcaag
ttcacaactgagagcctccagaagagcagcctcaggtaccaggacatcttggttgagctc
cccgttactgtccacaactcacatctcctcacctccctcctccaccagctgccttcggaa
gcgcccaaggaggagctttctttcccacccaacctagcggccctgcaacaggatcccaac
accccgctgcctcccctcttccccaactacgacgcgctcgacctgtcaatcgaccccttc
ctcgagaagacgtgcgacctgctcctcgagagcattgagaaccaccacacggagctcaac
aactaccagtactaccagcgacagcttgcccgtgagcagaccaagattaccgcatggcaa
cagaagcgcaaggcagagaacgcggcgcgcacagcctcgaagcagccacttctaccggag
gacgagtggcagaggctgttcaagttgccagctgagcctagccggttggagacgctgctc
aactccaggcaagtggagcagtactcgaggcaggttgacggtttcgctgctggcgtcacc
tccaagatgtttgcggtgaagagcaacctgcttcccggcgagtaa
DBGET
integrated database retrieval system
