KEGG   Parastagonospora nodorum: SNOG_06960
Entry
SNOG_06960        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
pno  Parastagonospora nodorum
Pathway
pno03022  Basal transcription factors
pno03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SNOG_06960
  09124 Replication and repair
   03420 Nucleotide excision repair
    SNOG_06960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pno03021]
    SNOG_06960
   03400 DNA repair and recombination proteins [BR:pno03400]
    SNOG_06960
Transcription machinery [BR:pno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     SNOG_06960
DNA repair and recombination proteins [BR:pno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     SNOG_06960
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 5974207
NCBI-ProteinID: XP_001797317
UniProt: Q0UMQ4
LinkDB
Position
Unknown
AA seq 312 aa
MNSIDASDRHVHIETAPPPSLLAVVLDTNPHAWAHLSSSISLSAALANILVFINAHLASG
NANESRNGTNGDVEMNGAEDNKPYIAENPNKYRAFALVESAILKNFAKLLEETNESHLAA
TPTTLIGGAISMALSYINKSTILHAPTGASAEITSVAAMADTDNSTHLDRIALTSRILIV
SVSGDLANQYIPVMNSIFAAQRKKIPIDILKLAGDTVLLQQASDATGGVYMKPERPEGLL
QYLMMAYLPDATARKSLIIPRIQKAATTWIYTRSDKMPAVMLAWRESRTLTMFDPIRGFG
VAPPTLPEVYAD
NT seq 939 nt   +upstreamnt  +downstreamnt
atgaattccatcgacgcctcggaccgccatgtgcatatcgagacagctccaccaccatca
ctactagctgttgtcctcgacacgaacccacatgcctgggcacatctctcgtcttccatt
tcgctctcggccgccctcgcaaatatcctggtcttcatcaacgcgcacctggcttctgga
aacgcgaacgaatcacgaaatggcaccaacggcgatgtcgagatgaatggagcagaggat
aacaagccttatatcgcggaaaaccccaacaagtaccgggcttttgcactggtcgagagt
gccatcctcaagaactttgcgaagctgttggaagagacgaatgaaagccatcttgcagca
acgcccacaacgctcataggcggcgccatatctatggcactgtcctatatcaacaagtct
accattcttcacgcaccaactggagcttcagccgagatcacctctgttgcggcgatggct
gatacagacaacagcacgcacctcgaccgtatagcgctcacctctcgtatcctcatcgtt
tccgtgtcgggcgacctggctaaccaatacatccctgtaatgaactccatcttcgcagca
caaagaaagaagataccgatagacatattaaagctggctggagatacagttctgctgcag
caggccagcgatgctactggcggggtctacatgaagcctgagaggcctgaggggctatta
caatacttgatgatggcatacctgcccgatgccacagcgcgcaagagcttgatcattccg
aggatccagaaagcggcaacaacttggatctacacgagatcagacaagatgccagccgtc
atgctcgcatggcgcgagtctcgcaccctgaccatgttcgatccaatccgcggcttcgga
gttgcacctccaaccctgcctgaagtctacgcggactag

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