Parastagonospora nodorum: SNOG_07095
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Entry
SNOG_07095 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pno03009
]
SNOG_07095
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SNOG_07095
Ribosome biogenesis [BR:
pno03009
]
Eukaryotic type
90S particles
Helicases
SNOG_07095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Helicase_C_2
Cas3-like_C_2
PAS_11
Motif
Other DBs
NCBI-GeneID:
5973938
NCBI-ProteinID:
XP_001797448
UniProt:
Q0UMB9
A0A7U2I548
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MGAPGITGRTRPTKVKKQASQQKRKRDDVDVEKLEQAVTELDPKTGTYNDFSDLPLSDPT
KQGLKACHFAVMTDIQRKAVPLALKGHDILGAAKTGSGKTLSFIIPVLENLYRLQHVGAD
AGLGALILSPTRELAIQIFDVLCKIGKHGHMFAAGLLIGGKSLESERQALPRMNILVATP
GRMLQHLSQTAAFLVDDLKMLVLDEADRILDMGFQRDVDAIIDYLPKERQTLLFSATQSK
KVSDLARLSLQDPEYVSVHAEDKSATPKSLQQNYIICPLEEKLDTLWSFIQASKKSKILV
FFSSAKAVRFVYESFRHMQPGIPLLHIHGRQKQGARLDTTAKFSSAKNSCLFATDVAARG
LDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVLFLAPSEEEGMLKRLEAKKVPV
EAINVRQKKRQSIKEQLQNMCFQDPALKYLGQKAFMTYVKSVYLQKDKEVFQLKEYDLEA
FAASLGLPGTPRIKFLKDDNSKQKKQASRQTIEVSDSDEEEAPKAEKPVRTKYDRMFERK
NQDVLAEHYKKLVRDGDEEISAPANDFSGEATTNGADDDFLAIKRRIPADDEDEDFGGEA
SVAPGGRVVHLAGASQPLIIDSNRREKLLQSKKKLTKLMDRGKKLVYDDDGNPHEVYELE
TEADFKAKGLPEHQRQKFIEAAREVVQTADVEDKATARAKRKEKLRKRKERERGEAEDDG
DEAVELEDTGENPLANFLADAQYTDDEQEEVEQPKKKEKKWFQSDSEDEEKSSKKKRKKA
KQQVVEEPETLEDMEALAAGLLG
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccccaggaatcaccggtcgcacgcggcctaccaaggtcaagaaacaagctagc
cagcagaagaggaaacgcgacgatgtggacgtggagaaactcgagcaggctgtgactgag
ctggaccctaaaaccggcacatacaatgacttcagcgacctccctctctcggaccccacc
aaacagggtctcaaagcatgccattttgccgtcatgaccgatatccaacgaaaagcggta
ccgctcgcgctcaaaggccacgacatactcggcgcagcgaagactggtagcggcaagact
ctttctttcataatacctgtgctagaaaacctataccgactgcagcacgttggtgcagat
gctggacttggcgcattgattctgtcgccaacccgagaactggcaatacagatcttcgat
gttctctgcaaaattggcaagcacgggcacatgtttgccgcaggattgttgattggagga
aagagcttggaatctgagcggcaggctttgccgaggatgaacatattggttgcaactccg
ggccgtatgctgcagcacttgtcgcagaccgcggcattccttgtggacgacttgaagatg
ctggtgttggatgaagcagacagaattcttgacatgggctttcagcgggacgttgatgcg
atcattgactacctgccgaaggaacgacagacactgctcttttccgcaacacaatccaaa
aaggtttcagacctcgcacgtctgagtttacaggacccagagtacgtctcagtacacgcg
gaagacaagagtgcgacgccaaagagtctacagcagaactacataatatgtccactcgag
gagaagctagacacgctctggagcttcatacaagcaagcaagaagtcaaagattttggtc
ttcttctcctccgccaaagccgtccgctttgtgtacgagtctttccgtcacatgcaacct
ggtataccattgttgcatatccatggccgacaaaagcagggtgctcgactagacacaacc
gccaagttttcgtcggcaaagaactcttgtctattcgcgaccgatgttgctgcccgaggt
ctagattttccggctgttgacttcgtgatacaagtggactgcccggatgacgtcgataca
tacatccatcgtgtcggtcgcacagcgcgatacaaccgagaaggacgaggtgtcctgttt
cttgcgccaagtgaagaagaaggtatgcttaagcgcttggaggccaagaaggttccagtc
gaggccatcaatgtgcgtcagaagaagaggcagtccatcaaggagcaactccagaacatg
tgcttccaagacccggcgctcaaatatctaggacagaaagccttcatgacatacgtcaag
tctgtctacctgcagaaagacaaggaagtcttccagctaaaggaatacgacctcgaagca
tttgccgcaagtctaggactgccaggtacacccaggatcaaattcttgaaggatgacaac
agcaagcagaagaagcaagcatcgcgacaaacgattgaggtatctgactcagacgaagaa
gaggccccgaaggcagagaagcctgtgcgaacaaagtacgacagaatgttcgagaggaag
aaccaggacgttttagcagaacattacaagaagctagtccgagatggagacgaagaaata
tctgcaccagcaaacgacttcagcggcgaagccaccaccaacggtgccgacgacgacttc
ctcgcaatcaaacgacgcatacccgccgatgacgaagacgaagactttggcggcgaagcc
tcagttgcaccaggcggccgtgtcgtgcacctcgccggcgcttcgcaacctctcatcatc
gactccaaccgccgcgagaagctcttgcagtcgaagaagaagctcacgaagctcatggac
aggggcaagaagctcgtctacgacgatgacggtaacccccatgaagtttacgaactcgag
accgaagcagacttcaaggccaagggtctgccagaacaccagcgacagaagttcatcgag
gcagcacgggaagtcgtgcagacagccgatgtcgaagacaaggccacggcccgagcgaag
aggaaggagaaactccgaaaacgcaaggagcgcgaacggggtgaggcggaggacgatggt
gatgaggccgtggaactggaagatacaggcgagaacccgttagcgaacttcctcgcggat
gcacagtatacagatgacgagcaggaggaggttgagcagccgaagaagaaggagaagaag
tggttccagtcggattcggaagacgaggagaagagtagcaagaagaagaggaagaaggcg
aagcagcaggttgttgaggagcccgagacgctggaggatatggaggcgcttgctgctggt
ttgttgggctag
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integrated database retrieval system
