Parastagonospora nodorum: SNOG_07533
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Entry
SNOG_07533 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pno
Parastagonospora nodorum
Pathway
pno03020
RNA polymerase
pno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SNOG_07533
09124 Replication and repair
03420 Nucleotide excision repair
SNOG_07533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pno03021
]
SNOG_07533
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_07533
Transcription machinery [BR:
pno03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
SNOG_07533
DNA repair and recombination proteins [BR:
pno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SNOG_07533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
5974761
NCBI-ProteinID:
XP_001797868
UniProt:
Q0UL31
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MDYDPEGGAINVRFLEANSQRANFIVQNFNLETANSLRRVMLAEIPTLAIDVVEVLDNTS
VLADEFVCHRLGLIPLSSRGVDDLLYARDCDCEGYCDNCAVVLSLNAKCTGSEIMKVFAR
DLVIESNRPNDEVGRPVITDSEGTGSCIVKLRRGQAINMRCIAKKGIAKEHAKWAPSASA
IGFEYDPANKLHHLDYWFEENAAAEWPKDEERINLDGGPELPDTEFDHKAVPERFFYDVE
TVGGLDPDQIVTKGIETLQQKLASVIKELHGDSGDPDSMDLGGAQSPTMNGAGYPGADGG
YTTPGYGGASAWGGAGGAAQGGTTPYGATPYGNSW
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggattacgacccagaaggcggcgcaatcaacgtgcgcttcctagaggccaacagccaa
cgcgccaacttcatcgtccaaaacttcaacctcgagacggccaactcgctgcggcgggtt
atgctggctgagattcctacactagccatcgatgtcgtcgaagtcctcgacaacacctca
gtgctcgccgacgagttcgtatgtcatcgccttggtctgattccactttcgtcaaggggc
gtagacgatctgctctacgcgcgcgactgtgattgtgaaggatactgcgacaactgtgcg
gtagtgctctcgctgaacgcgaaatgcacgggaagtgagatcatgaaggtgtttgcgcgc
gatttggtcatcgagagcaaccggccgaatgacgaagtgggacgaccggtcatcacagac
tcggaaggcacaggcagctgtatcgtgaagctacggagaggacaggcaataaacatgcga
tgtatcgcgaagaagggtatcgccaaggagcatgcgaaatgggcaccctctgcgagcgcc
atagggttcgagtacgatccagcgaacaagctgcaccacctggactactggtttgaggaa
aatgctgccgcagaatggcccaaggacgaagaacgcattaacctcgacggcggccctgaa
ctgccggacacagaattcgaccacaaagccgtcccggaacgcttcttctacgacgttgag
actgtcggcggcctcgatccggatcagattgtcacgaaaggcatcgagacacttcagcaa
aagcttgcctccgtcatcaaggaactacatggcgacagtggcgacccagacagcatggac
cttggtggcgcacagagtccaacaatgaatggggcgggctatcctggtgcagacggtggc
tacactacgcctggctatggcggagcaagtgcgtggggtggtgctggcggtgcggcgcag
ggcggtacgacgccgtatggagctacgccatacggtaacagctggtag
DBGET
integrated database retrieval system