Parastagonospora nodorum: SNOG_07642
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Entry
SNOG_07642 CDS
T01161
Symbol
SNOG_07641
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
pno
Parastagonospora nodorum
Pathway
pno03030
DNA replication
pno03410
Base excision repair
pno03420
Nucleotide excision repair
pno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SNOG_07642 (SNOG_07641)
03410 Base excision repair
SNOG_07642 (SNOG_07641)
03420 Nucleotide excision repair
SNOG_07642 (SNOG_07641)
03430 Mismatch repair
SNOG_07642 (SNOG_07641)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pno03032
]
SNOG_07642 (SNOG_07641)
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_07642 (SNOG_07641)
DNA replication proteins [BR:
pno03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SNOG_07642 (SNOG_07641)
DNA repair and recombination proteins [BR:
pno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SNOG_07642 (SNOG_07641)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
Rad17
AAA_14
AAA_16
AAA_22
AAA_5
AAA_33
RuvB_N
AAA_28
nSTAND3
NACHT
AAA_18
Motif
Other DBs
NCBI-GeneID:
5974868
NCBI-ProteinID:
XP_001797975
UniProt:
Q0UKS2
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MPADIRSFFGGGPTKASEGSQGSQKKDEPKTKKAAPKKSGRASRVVDDSDDEEEEEVKPT
KTTPKKPPPKKAKREPTPELEETTTSDFFAASNKPKRTEPVKRKSAETPKATPKKAAARV
SKTSTPASNGRASGRAKKPIRSYAERDNEDEFPDDDLDGADDIFGDDIKGKKQDDYTEVA
ESEDDLAVKLPHRGTPKMPAKQQKKIVEEDDFEPDDEDVDMKDVDAEADFVEPTDDEQAA
GSKPKKISTAGRKRKSPDLDEDEDDLEDEEEKPKKGRAKKATAAKSPVKKKAKKEEVSES
ADHQAIYDMIPTVRAPTPPPKDKDAKFDWRANAGRAEPAPLQGASGDMPSGSDTCLAGLN
FVFTGVLKKWGRTEAQELVKRHGGKVTGAPSKKTNYVKIHDLGIQTIEEDGLSMLIEKLT
EVGNKGDSKAQAAYKEKQRKEEENIKKQAAELEKEDKKREKEKKAADVAAGRTTASAATA
AAQSDGPAVDTRLWTTKYAPSSLNQICGNKVTVERLQRWLQKFPKNVKTNFKLAGADGSG
VFRAVMLHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKKLIEEGLRGVLSTNSLHGY
FAGDGKKVESAKKKLVLIMDEVDGLKMPAPVVNALIEGSHADIRQVVNMISTAKLDQEAM
DFDSGKRMSKNWEKHVILKPWDITQKILGGGMFAASSKATLNEKIELYFNDHEFSPLMLQ
ENYLGTNPMQALNYSGKEQNLKKLELASQAADSISDGDLVDRMIHGSQQQWSLMPTHAVF
SFVRPASFVAGSTAGNQTRFTSWLGKNSSTNKLSRLVKEIQAHMRLRSSGDRHEIRQQYI
PVLWTELVQKLQKEGKDAVGPIIELMDSYYLTKDDFDAIMELGVGPMDQEKVKIETQAKA
TFTRLYNQQSHPLPFMKASSVVAPKKQAKEKPDLEEAIEESDDGEVIEEVKDEDEEADLS
KDKYVKQPKKKAAAKKSAAAPKKGKRKAKDDESEEEADEDVKPKGKGKGKAAVAKGKKK
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgacattcgtagcttctttggtggcgggcctaccaaagccagcgagggaagc
cagggctcgcagaagaaagacgagcccaagaccaagaaagcagcgcccaaaaaaagtgga
agggcaagcagagtcgtcgacgattccgatgatgaggaggaagaggaagtcaaaccaaca
aagaccacacccaagaagccaccgccaaagaaagccaagcgcgaaccgactcccgaactc
gaagagaccaccacatccgacttctttgcagcgtcaaacaagcctaaaaggacggagccc
gtaaagaggaagagcgccgagacgccaaaggcgacaccgaagaaggccgcggcacgcgtc
tccaagacatctacccccgcatccaatggcagggcttcgggacgagcgaagaaacctatc
aggtcctatgctgaacgggacaatgaagacgaatttccagacgacgacctagatggtgcg
gatgacatttttggcgacgacatcaagggcaaaaagcaggacgattacacagaagtcgcc
gagagcgaggatgacttagccgtgaagctgcctcaccggggaacacctaagatgcccgcc
aagcagcaaaagaagattgtggaagaagacgattttgagccagatgacgaagatgtcgac
atgaaagatgtggacgcggaggccgatttcgtagagccgactgatgacgagcaggccgca
ggaagcaaacccaagaagatatcaacggctggtcgaaagcgcaagtcgccggatctagac
gaagatgaggacgatttagaagacgaggaagagaagccgaagaaaggacgagccaagaaa
gcaactgcagcgaagtcgcccgtcaaaaagaaagcaaagaaggaagaagtctcagaaagt
gcagatcaccaggccatctacgacatgatacctaccgtacgcgcacctacacctccgccc
aaggacaaggacgcaaaatttgactggcgagcgaatgctggccgcgcagagccagcaccg
cttcaaggggcatccggagacatgccttcaggatcagatacttgcttggcaggcttgaac
ttcgtcttcaccggcgttctgaaaaaatggggtcggacggaagcacaagagctcgttaaa
cgccatggtggcaaagttactggtgctcccagcaagaagaccaactatgtcaagattcat
gacttgggaattcagaccattgaagaagatggcttatcgatgctcatcgagaaactcaca
gaagtcggcaacaaaggtgactcaaaagcacaggcggcctacaaggaaaagcaacgcaag
gaagaggagaacatcaagaagcaggcggccgagctcgagaaggaagataagaaacgagaa
aaggaaaagaaggctgccgatgtagccgctggtcgcacaacagcttccgctgcaacagct
gcagcccaaagcgacggtccagctgttgacacccgactctggacgaccaagtatgctcca
tcgtctctgaaccagatttgcggcaataaggttacagtggagagacttcagagatggctg
cagaaattcccaaagaatgtcaagacaaattttaagcttgctggagcagacggaagtggt
gttttccgtgccgtcatgcttcacggacctcctggaattggcaagactacagcagctcac
ctggtagcgaaacttgagggctacgacatcgtggagcgaaatgcaagtgacactcgcagc
aagaagctgatcgaagagggcttgcgcggcgtattgagtaccaactccttgcatggctac
tttgctggtgacggaaagaaagtcgagtcggcaaagaagaagctggttctcatcatggat
gaagtcgatgggctcaagatgccggcacctgttgtcaatgcactgatcgagggtagccac
gccgatattcgtcaggtcgtcaacatgatttcgacagccaagctagaccaggaagccatg
gactttgacagtggcaagcgcatgtcgaagaactgggaaaagcatgttatcctcaagcca
tgggacattactcagaagattcttggaggcggcatgttcgctgccagcagcaaggcgacc
ctaaacgagaagatcgaactctacttcaacgaccatgaattcagtcctctcatgctccag
gagaactacctcggcactaatcctatgcaagccctcaactactctggcaaagaacagaat
ctgaagaaactcgaacttgcttcacaagcagctgatagtatcagcgatggtgatcttgtg
gaccgcatgatccacggctcccagcaacaatggagtctcatgccgacacatgcagtcttc
agtttcgtccgcccagcaagttttgttgctggcagcacggctggtaatcagacacgcttc
acatcgtggctgggcaagaacagcagcaccaacaaattgagccgcctggtgaaggagatt
caagcacatatgcgtttgcgttcttcaggcgatcgacacgaaattcgacagcaatacatt
cctgttctttggacagaactcgttcaaaagctgcaaaaagagggcaaggatgccgtcgga
ccaatcattgagctcatggacagctactacttgaccaaagatgactttgatgctatcatg
gaactgggtgttggaccgatggatcaagagaaggttaagatcgagacgcaggccaaggca
acgttcacacgactctataaccaacagtcacatccgctaccattcatgaaggcgtcttct
gttgttgcaccgaagaagcaagcgaaggagaaacccgatcttgaggaagcgattgaggaa
tccgacgatggagaggtgatcgaagaggtcaaggacgaggacgaggaggcggacttgtct
aaggacaaatacgtcaaacagcccaagaagaaagcagcggccaagaagagtgcagccgca
ccaaagaagggcaagagaaaggctaaagacgatgagagcgaagaagaggcagatgaagac
gtcaagcccaagggcaaaggcaaagggaaggcggcggttgcaaaaggaaagaagaaatga
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