Parastagonospora nodorum: SNOG_07756 Help Entry SNOG_07756        CDS       T01161                                  Symbol SNOG_07755 Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism pno  Parastagonospora nodorum Brite KEGG Orthology (KO) [BR:pno00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pno03021]     SNOG_07756 (SNOG_07755) Enzymes [BR:pno01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      SNOG_07756 (SNOG_07755)     5.6.2.5  RNA 5'-3' helicase      SNOG_07756 (SNOG_07755) Transcription machinery [BR:pno03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      SNOG_07756 (SNOG_07755) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 AAA_30 Viral_helicase1 DEAD UvrD-helicase nSTAND3 ResIII T2SSE Motif Other DBs NCBI-GeneID:  5974979 NCBI-ProteinID:  XP_001798086 UniProt:  Q0UKF8 LinkDB All DBs Position Unknown AA seq 1955 aa AA seqDB search MLLRETSPVVTSNQLYAYSELRALPEDQHLFCPRVGEDDQIYFPEDVANYPPETDPAELE ARKTKLQEAEERKWSALKAMEILAYDGDEAAPHKEWLTNRVDQHMESCEVCVRVFYMSRP EWRIRLIDTYDEENIVDFMRLVDESCLGRIRKGLEEANRLLKSTYAFFEALSCDAMIRDE GLLQEVFDTPFDLVQTKKRLKLQTYLPAMTRFLFSKNARRLDWATKSWVGFKRDLLKSEF EWAVRDHLINVMMKVQMTNLDMSYVPLFWGGVRLIIERMDKELITEYIRSLDGDFYRLML DHLSLRPEGFSEGFFELVATMKLLLEKAPVDFWDGMNAITPSIANVAEQVFNSPVLKHLL TAVTYTPEDQQNLEAAFSWIPPFLASIKVSNLGPAVRPFANALFGRYQLDHFTPLARSYC FKQGMRVLVVAFKTMGEYKQHTDFVGQPTVNGMLEMLTTYIDLIVSNLKRFNGSKENEEE LQLALSVIQYAFQLEAKSLVVERQLINAKQPSPTETPSSTAIWKTVLRAIDASNLDLATH LLIAGRTLIGLEPLSMKAGVDKVPATVRHFNDRFKTLSQSITDIVERLSEFHPAKLQALF EKQSAASAIISLLFSSTEDTRSAVIELLKIISSEDERRNALQHVLRTYYRNALGGISDSI RQVKIRKAFAPAPSMIKTCSDIIDVMCNSQDGILRSRSLEQSEIATTMTFWRGQWEMLTM IFATTEAWSNLGFYEKQQMMDFCRDTMQFADQLFDQYSILVAALKANAEEGSNKSNLLKE LLAEPANAMDGLARWLRLRDEFLSSKSVTLISKLLVRLHNVSIEITADTLSYMERILSGE IRAKLSATQQAELQQALETHLGRPLVKEEEVKPKQASISKWMSTGTDRASTSGNLMSQLT SGASAFQQKREQMKAAEAKTAKLKTLEIQKAAAQDDFKKKRQLEKQKREQEKAAAIAKAR AARGIPSHIAEAGSGLEGLGVLGKDQAAKGEGLMHSSDESEDSDGDLDEEIFGIKKTKNK AGPKTNIINEVKIQMPTKKKRAVRSARDMRARLAPDLTALHRAFLGWDYFHEGDYPPKAR PEMYSKIPTTFRTPNDYQSTFEAFLTLEAWQGFVKERDENQAKPYEVRITSRASVDAFQE LGSTMTFAENKEMRIGEGDIVVLSVSRKLSANEPSCLARVSKAKRKGQHIEVLYRVLPAN PLSSSLQPNNTVFGLKVQSIMTLEREYGALKGLQYYDLCDEIIKARPSPLLTYSDKQTEP LIQNYNVNKAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAVLSDSLRNRGTTITV PGQQRSETASKKLLVCAPSNAAVDELVMRFKAGIKTLNGEVRKVNIVRLGRQDKLNAAVQ DVCLEGLISKRLGQDPGQGKGQDPEAKSKMYEEHKQVSEQLRNGNAQRDSGELKGDAAAK LESDLFALRQRKAALGRQIDNSKDEERLQSRNSDLSRRRAQEAILNDAHIICATLSGSGH EMFQGLSIEFETVIIDEAAQCVELSALIPLKYGCAKCVLVGDPKQLPPTVFSKVASRHQY SQSLFARMEKNHPNDVHLLDTQYRMHPEISLFPSREFYDGKLMDGGDMATIRKQPWHQSM LFGPYRFFDVAGQQSAAPKGHSLINRAEIEVAMKLYHRLTSDFPDYNFRGKIGIITPYKS QLTELKTRFASVYGAQIIEDIEFNTADAFQGRESEIIIFSCVRASDRGGLGFLEDIRRMN VGLTRAKSSMWVLGHAPSLSRGEFWRGLVEDAQERKRFTTGNLTQMLNQHSSKFPAPKEG YVQPHRPLVEIKSEPMSRSGSGQSNESDRKPTKQEIKQEVKQEIKEEPGLVHHPKRKAED KDEFDLFGDVQDDGDINMEDAQSDSASNTLNGGSGRSTPAASSDIARKSATPGADAPNGA DAGAGPTHVLAAMAKPKIRRKPNPFIKQKKKPKTG NT seq 5868 nt NT seq  +upstreamnt  +downstreamnt atgctcctacgcgagacatccccagtggtcacgtctaaccagctctatgcatacagtgag ctccgagcgctaccggaggaccagcatctcttttgcccacgcgtcggcgaagatgatcaa atatacttccccgaagacgtcgccaactatccgcccgaaaccgatcccgccgagctcgaa gcccgcaagaccaaactgcaagaggccgaagagcgcaaatggtctgcattgaaggccatg gagatactcgcgtatgacggagacgaggcggcaccacacaaggaatggctcaccaatcga gtcgaccagcacatggagagctgtgaagtctgcgttagggtcttttacatgtccaggccc gagtggaggatacggctgatcgacacttacgacgaggagaatatcgtcgatttcatgcgt ttggtcgacgagagctgcctgggccgcatacggaaaggactggaggaggccaacaggttg ctgaaaagcacgtatgccttctttgaagcattgagctgcgatgccatgattcgggacgaa ggcctactccaagaagtttttgacacgccgttcgacttggtccagacgaagaagcgccta aagcttcaaacataccttccagccatgacccgcttcttattcagtaagaacgcgagacgg cttgactgggcgaccaagtcatgggtggggtttaagcgagacttgctgaagtctgagttc gaatgggccgtgcgtgaccatctcatcaatgttatgatgaaggtgcagatgaccaatctg gatatgtcttatgtgccactcttttggggcggcgtacggctcattatcgaaaggatggac aaggagctcattacagagtacattcgtagtcttgacggtgacttttacagattgatgctt gaccatctctccttaaggccggaaggcttctcagaaggcttctttgagctggtagctacc atgaagctgctgctcgaaaaggccccggtcgacttctgggacggcatgaacgccattact ccatccattgcgaatgtggcggagcaggtcttcaacagccctgtcttgaagcacctgttg acggcagtcacatacactccagaggaccagcagaacctcgaggctgccttcagctggata cccccgtttcttgcatccatcaaagtctctaacctcggccctgcggttcgaccatttgct aacgccctctttggccgctatcagttggatcacttcacaccactggcaagatcatattgc ttcaagcaaggtatgcgagtccttgttgtcgccttcaagaccatgggcgaatacaaacaa cacaccgattttgttgggcagcccacagtaaacggcatgctggagatgctcaccacttac atcgatctgatcgtcagcaacctgaagcgcttcaatggcagcaaggagaacgaggaagag ttacaactggcactatctgtgattcagtatgctttccagctcgaggccaagtcgctggtc gttgagagacagctcatcaacgcaaagcagccctcacctacagagacgccttcatctacc gccatatggaagacagtcctccgagccatcgacgccagcaaccttgaccttgcgacgcac ttgttgatcgccggcagaacgctcattggtcttgagccattgtccatgaaggcgggagtc gacaaagtgcccgcgacagtacggcactttaacgatcgcttcaagacactctcccaatcc atcaccgacattgtcgaacgactatcagaatttcacccggcgaagttacaggccctattt gaaaaacaaagtgcagctagcgctatcatctccctccttttctcatctactgaagacacg aggagtgctgtcatcgagcttctcaagatcatcagctcagaagacgaacgtcgaaacgct ctgcagcacgtcctcaggacctattaccgcaatgcattgggcgggatttccgactcgatc cgccaagtcaagatcaggaaagcttttgctcccgcgcctagcatgatcaagacttgctct gacattattgatgtcatgtgcaattcgcaggatggtatactgcgatctcgaagcctcgag cagagcgaaatagcaactaccatgactttctggaggggccaatgggagatgctcacaatg attttcgccaccacagaagcgtggagcaacttgggtttctacgagaagcagcagatgatg gacttttgccgagacacgatgcagttcgcagatcagctcttcgaccaatacagcatcttg gtcgccgccctgaaagctaacgctgaagaaggaagtaacaagtcaaacttgctgaaagag cttctggctgaacccgcaaatgctatggacggactcgccagatggctgcgtctgcgggac gagttcctatccagtaaatccgtcacgttgatcagcaagcttcttgtccgccttcacaac gtgtccatcgaaattacagcggacactctatcctacatggagagaatcctgtctggtgaa attcgcgccaagcttagtgcgacacaacaggccgaattgcagcaggctctggagacgcat cttggtcgccctcttgtgaaggaggaagaggtcaagccaaagcaagcctcgataagcaaa tggatgtcaactggtacagaccgggcatcaacttcaggcaaccttatgtctcaattaacc tcaggtgcgagtgcattccagcaaaaacgagagcagatgaaggctgcggaggccaagacc gcgaaacttaagactctggaaattcagaaggctgcggcgcaagacgatttcaagaagaag cgccagctggagaagcagaagcgcgaacaagaaaaggccgctgccatcgcgaaagcaaga gctgctcgaggcataccatcgcacatcgcagaagcaggttcaggcctagaaggtctaggt gtcctaggtaaagaccaggctgcgaagggagaaggcctcatgcactcatccgatgagtcc gaagacagcgatggtgatctcgacgaagagatcttcggcatcaagaagaccaagaacaag gctggaccaaagacgaacatcattaacgaggtcaagatccagatgcctaccaagaagaag agggccgtgcgttctgctcgagacatgcgtgctcgccttgcgcctgatctgaccgctctc caccgggctttccttggttgggactacttccacgaaggcgattatccaccaaaagcacgc ccagaaatgtactccaagattcctacaacatttcgcacccccaacgattatcagtctact ttcgaagcttttctcacgcttgaagcatggcaaggttttgtcaaggaacgagacgagaac caggccaagccctatgaagtccgcataacgtcaagagctagcgtcgatgcgttccaggaa cttggaagtactatgaccttcgctgagaacaaggagatgcggattggtgagggcgacatt gtggtgttgtcagtgtctcgaaaactgtcggcaaatgagccgtcttgtctcgctagagtc tccaaagcgaagaggaaagggcaacacatcgaagtgttgtatcgtgtcttacctgcaaac ccgctttcgtcttcgctgcagccaaacaataccgtattcggattaaaggtccagtccatc atgaccttagagcgcgaatacggtgcattgaagggtctccagtactacgacttgtgcgac gagatcatcaaggccaggccatctcctttgttgacatacagtgacaagcaaaccgagcct ctgatccagaattacaatgtgaacaaggcgcaggcgaaagccatcaagtcagcgattgac aacgatgcattcacgttgattcaaggtccacctggttctggtaaaaccaagacaattact gcgattgtgggagcagttttgtcagacagcctccgcaatcgtggcacaaccattactgtt cctggccagcagcgttcagaaactgcctccaagaagctactggtttgcgcacccagtaac gctgctgttgacgaattggtcatgcgtttcaaggccggcatcaagacactcaatggagaa gtgcggaaagtcaacattgtacgtctgggtcgccaagacaagctcaatgcagctgtacag gacgtatgtctagaaggcctaatcagtaagaggctcggtcaagatccaggtcaagggaaa gggcaagacccagaagcgaaaagcaagatgtacgaagaacacaagcaggtttctgagcag ttgagaaacggaaacgcgcaaagagatagtggagagttaaagggcgatgctgcggcaaag cttgagagcgatctttttgcgctgcgtcaacgcaaggctgctctgggtagacaaatcgac aacagcaaggacgaagagaggctccagagtcgtaactcagacctcagccgccgcagggcg caagaagcgatcctcaacgatgcgcatattatttgtgctacgcttagtggttccggacac gagatgttccagggactcagtatagagttcgagactgtcatcattgacgaggctgcgcag tgtgttgagctgagtgctctcattcctctgaagtacggttgcgcaaagtgcgtgctggtc ggtgatccaaagcaattgccacctacggtgttttcaaaggtggcatcgcgccaccagtac tcgcagagtcttttcgctcgtatggagaagaaccatcctaatgatgtgcatctactcgac acgcagtatcgtatgcatcctgagatcagcttgtttcctagtcgggagttctacgacggc aagctcatggacggtggggacatggcgactatccgcaagcaaccatggcatcagagtatg ctgtttggaccataccgtttctttgacgtggcaggccaacaatcagccgcgccaaagggt cactcgcttatcaatcgcgccgagattgaagtagcgatgaagctgtatcaccgactgact tcagactttcccgactacaacttccggggcaagatcggcatcatcactccgtacaaaagt cagttgacggagctcaaaacacgctttgcgtccgtctatggagcccaaatcatcgaagac attgagttcaataccgcggatgcctttcaaggtcgagagagcgagatcatcattttctcc tgtgtgcgagcctccgatcggggaggccttggtttcttggaggacattcgacgtatgaac gtcggtctcacacgtgcgaagtcttctatgtgggtgctcggccacgcgccatcgcttagt cgtggcgagttctggcgcggattggtggaagatgcccaggagaggaagcggttcacaact ggaaacctgacccagatgctcaaccagcattcgagcaaattccctgctcctaaagagggc tatgttcagccgcatcgaccgctagttgagatcaagtctgaacctatgagtcgctcggga agtggccagtcaaacgaatcggaccgcaaacccaccaagcaagagatcaagcaggaagtc aaacaggagatcaaggaggagccaggtcttgtccaccacccgaagcgcaaagctgaagac aaggacgaatttgacctctttggcgatgtgcaggatgatggtgacataaacatggaagat gcacagtcagattccgcatcgaacacgctcaatggtggtagtggtcgatcgacaccagct gcgtcttccgacattgcacgaaagagcgccactcccggtgcagatgcaccaaatggcgct gacgccggggcgggtcctacacatgtgctggccgccatggcaaagcccaagatcaggcgg aagccaaacccatttatcaagcagaaaaagaaaccgaagactggataa

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