Parastagonospora nodorum: SNOG_08340
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Entry
SNOG_08340 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
pno
Parastagonospora nodorum
Pathway
pno03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SNOG_08340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pno03009
]
SNOG_08340
Ribosome biogenesis [BR:
pno03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SNOG_08340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
5975558
NCBI-ProteinID:
XP_001798660
UniProt:
Q0UIS4
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MAETSAQLKRKRESAAGLQKKAKKQRKSDATAAGAEEDVVAAEVAEPTQGPKAIPQTQDK
TKKASRKAQANGAPDQDAAVPSSTKPIKDAEAQQNGGPDKSNSSKQSKKQRKQDQKDSKN
EQLNGDGPVEGLGAQAMPTPTKSPIQDPAAPAKKSFKERVAESKEAAKAEVAEVQSSAPA
KKHKQKAPGKWAVSQVQGGWFLPTDPVFSQDEKCLLLANPKGVQNSRHMRYLQPNPSHVY
VADSNCLISLWDWVAGTKIARWDIGATVRNMVVITQPGTDEDLVYCHETGDKHVVNVHAL
RTKSQASKTELKHHPGSPPGHNIVIISTADSITVGKRLKVSKTAVQEFEYVWRELKFSKR
VTTCDTYFRQREVPENGKKSAQDQRDVLDLAVGDEIGVILLFEDILASFAALESVQKGNQ
SRTDSVESLRPKKLHWHRNAVGSVKWSLDGNYLISGGDETVLTIWQLATGKPQHLPHLTA
AIESVVVSPTGSSYALSLANNSVIVISTTELEAKTNIVGVQTRRVDPEQLPKETKSGKPA
LYALQSVPIAVDPKHTQQVLFTVPASQPRQNISGVLPEPYLQTFDIANQRPVDRQALTRN
NATDPNMGPDGERIKEPNVRHIQVSYDGQWLATVDEWLPPRADTAFLHEGNSEFTEEQRL
LRREVYLKIWRRDEKNGQWTLETRIDAPHFLEDVCGNGRVLDLVAHPKEHIFATIGEDHI
IRTWKPKTRLRDGIVVRGADNKGLVNWSLHRSITLPDPDKVWLAEATLEAEYNRTSRLAF
SPDGSVLAAGVSGASESDRGLIHLVDTDNAAIRRSMTEIDATVLCGLGIVGRCLVVVTDC
ITVWDLVNDDMVYCASINTTGVDSVERTSVVRLATNEVDGTFALSLPHFEKNDNPSFRFK
KASSKVFVYDTEHKDPLWSHTVPGITLGLTARKGQGERGYIALDSRSCIRTISPAAGSLA
LPLHQKSEEPEVQSMEIDAVEDVEEAEEGVASKALADLVLENEYDKPVVTQQDLEEIFHN
DGAPQAPKDVFSAVLRLFGGVATAAA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaactagtgcgcagctgaaaagaaagagggaaagcgcggccgggctgcagaag
aaggcgaagaagcagaggaagagcgatgcaactgcggcaggtgcggaggaagatgtggtt
gctgcagaggtagctgagccgacacaaggaccgaaggcgattccacagacacaggacaag
acgaagaaagcatcgcggaaagcgcaggcgaacggtgcgcccgaccaggacgcggcagtc
ccatcgagtacgaaaccgatcaaggacgcagaggctcagcagaatggaggccctgacaaa
agcaattcttcgaaacagagcaagaagcagcggaagcaggaccagaaagacagcaagaat
gagcagctgaatggtgatgggccggtagaaggtttgggcgcacaggcgatgccaacacca
acgaaatcgcccatacaggatcccgctgcgcctgcgaagaagtctttcaaggagagagtg
gcagagagcaaagaagccgccaaagcggaggtggcagaggtgcaaagctcagcgcccgcg
aagaagcacaagcagaaggctcccgggaaatgggccgtctcccaagtacaaggaggatgg
tttctgcctaccgaccccgtcttctcccaggacgaaaagtgcctgctcctcgcgaatccc
aaaggcgttcagaattcacggcatatgcgctatcttcaacccaatccctcgcacgtctac
gtcgccgactcgaactgccttatctcactatgggactgggttgcaggaacgaagattgct
aggtgggatattggagctaccgttcgcaacatggtggtcatcacgcagcccggtaccgat
gaggatctcgtatactgccacgaaacaggcgacaagcatgttgtcaacgtgcacgctctc
cgcaccaaatcacaggcctcaaaaacagaactgaaacaccatccaggttctcctccaggg
cacaatatagtcatcatctccacagccgactcgatcactgttggcaagcggctgaaggtc
agcaagacagctgtgcaagagttcgaatatgtctggcgcgagctcaagttctcaaagcgc
gtcaccacatgcgacacatacttccgccagcgagaggttccagagaatggcaagaagtcg
gcgcaagatcagcgtgacgttctcgatctagcagtgggtgatgagattggtgtcatactt
ctcttcgaggatatactggcaagttttgctgcgctggagagtgttcaaaagggcaaccag
agtagaacagatagtgtggagagtctgagaccaaagaaactgcattggcacagaaatgcg
gtgggctcagtgaagtggtcccttgatggcaactacctcatctctggtggcgacgagact
gtcttgaccatctggcaattggccactggcaaaccccaacatctcccacatttgaccgca
gcgatagagagcgtcgtcgtttcccccaccggttcctcatacgccctctcactcgcaaac
aactctgtgattgtgatatcgacaaccgagctcgaagctaaaacaaacatagttggagtg
cagacacggcgggtggatccggagcagctgcccaaggagacgaaatctgggaagcctgca
ttgtacgctctgcagtcagtaccgattgccgtggatcccaaacacacacaacaggtcctg
ttcactgtacctgcatcacaaccacgacaaaacatcagtggtgttctccccgagccatac
ctgcagacctttgacattgcaaaccaacgccctgttgatcgacaagctctgacacgcaac
aatgcaacagaccccaacatgggcccggacggtgagcgtatcaaagaacccaatgtaaga
cacatccaggtgagctacgatggacaatggctggcaacagtagacgagtggttaccacct
cgggcggacactgcgttcctccacgaaggcaactccgaattcaccgaagaacaacgcctg
ctgcgtcgcgaggtgtacctcaaaatctggcggcgagacgagaaaaatggacagtggaca
ctggagactaggattgacgcaccacatttccttgaggatgtctgtggcaacggcagggtg
cttgacctagtcgcacaccccaaggaacacatcttcgcaactatcggtgaagaccacatt
atccgaacttggaagcctaagacaaggttgcgcgatggtattgttgtgcgaggcgctgac
aacaaggggctggtcaactggtcgctgcaccgatctattacacttcccgatcccgacaag
gtctggctggccgaggcgacactcgaggctgagtataatcgcacttcccgtctggccttc
tcaccggatggctcagtgctcgccgctggcgtgtctggtgcatccgagtctgaccgtgga
ctaatccacctcgtcgacaccgacaatgccgcgatccgccgctcaatgaccgagatcgac
gcgacggtactttgcggcttgggcattgttggccgatgcctcgtcgttgttaccgactgc
atcactgtatgggatctggtcaacgatgacatggtatactgtgcatcgatcaacaccacc
ggagtcgactctgtcgagcgcacatccgtcgttcgcttggcgaccaacgaggtcgatgga
accttcgctctctctctgcctcactttgaaaagaacgacaatccctcttttaggttcaag
aaggcttcatcgaaagtgttcgtctacgacacggagcacaaagacccattatggtcgcat
acagtaccaggcatcacactcggcctgacagcaaggaagggccagggcgagaggggatac
attgcactcgactcaaggtcatgcattcgcaccataagcccggcagctggatcattggcc
ttgcctctgcaccagaagtcggaagaacccgaggtccaaagcatggagattgatgccgta
gaggacgttgaggaggcggaagaaggagtcgcaagcaaagcgcttgccgatcttgtgctc
gagaatgagtatgacaagccagttgtcacgcagcaggacctggaggagattttccataat
gatggcgcgcctcaagcaccgaaggatgtgtttagtgcggtgttgcgtctttttgggggc
gttgctactgcggcggcttag
DBGET
integrated database retrieval system