Parastagonospora nodorum: SNOG_08452
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Entry
SNOG_08452 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
pno
Parastagonospora nodorum
Pathway
pno03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SNOG_08452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pno03009
]
SNOG_08452
Ribosome biogenesis [BR:
pno03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SNOG_08452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
WD40
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Cytochrom_D1
Nucleoporin_N
Beta-prop_DCAF4
NBCH_WD40
Utp8_b_propeller
DUF7165
TAF1C_beta-prop
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
5975661
NCBI-ProteinID:
XP_001798763
UniProt:
A0A7U2HY89
Q0UIG2
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MAGPKVHLSSASGPVTKRQKLHLHSEKSSSAVVRQSNIFAPFRTVGLVSPTSVPFTSLPL
GKTTFQITTSVGRSLQTYDLKRGLTLVFITRPQTPEEITATVAWKKVVFAAWSGSARNET
ARGIWVYQRGKKVAELELPQGGIEKISRLVVMGEWIVGCGANKVDVWKTATLEHYTTLHG
ASSSNLSGCICNMPTYLNKIFLGQQDGSVEIWNLSTGKLLYTLLPPAADFGAVTAMQPTP
ALPLLAIAYRSGPVTIHNIRTDKEVMRLNTGGSQKLPVTSITFRTDGLGAGDDGREDGVM
ATSSSESGDITFWDLNKGGRKMGTLRGAHSPPPSASGGVGGGISKVEFLAGQAVIVSSGL
DNSLKSWIFDETPFSPLPRILHSRGGHAAPVSTLRFLPSNSDGSDDTGKWLLSASQDRSL
WGWSLRRDGQSTELSQGAIQKKAKKTGLLNGNAEGSRHHAKLEDLKAPTITCMACSLNRD
GGMGAMPGVTGIWNNSSKVKGQDKKASEVSMTGWESIVTGHAGDKTARTWFWGRKRAGRW
AFDTSDGSPVKSVAISACGTFALIGSTNGAIDMYNLQSGQHRRRFPARLTPAEAKKYKLQ
QLQAEDSTLGTDMELPRKFAKGEGKHKGSVTGLAVDGLNRTVISSSDDGKVKFWDFTTGT
LLHEIDWYPMTKVFGLRYHHNSDLVALSCDDGSIRVLDIETKKLIRELWASRSHAELQTL
DYNFSNDGRWIVSAASDSTIRVWDLPTGHLIDAMKLPKKCNTVAFSPSGEFLATGLDDEV
GVHIWTNRTLFTHVSTRQIKEEEIAAVTAPTASGEGGVAVVEAAAEESDEEEFDETTVPV
MDQLSDNITTLSLVPKSRWQTLLHLDVIRARNKPKEAPKAPEKAPFFLPAVGQDKTSTTD
NALAPLSKDPASRISSSALTSRSSAATATNDFTRHLALAAVTAEYTTLLTYLSSLPPSAA
DIAIRTLDTTEPYTELRTFIQALSARLQERRDYELVQAWMSVFLRLHGDVVVQESDLVNE
LKKWQDEAKRERERVGGLVGYSVGVVGWVRSAR
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtccaaaggtgcacctctcgagcgcaagtggtcccgtgaccaagcgccaaaaa
ctgcaccttcacagcgagaaaagctcgtccgccgttgtccgccagtccaacatcttcgcg
cctttccgaaccgttggcctcgtttctcctaccagtgtccctttcacatctctcccactc
ggcaaaaccaccttccagatcaccacatccgtcggccgctcgctgcagacgtacgacctc
aagcgcggactaacccttgtcttcattacccgcccgcagaccccagaagaaatcaccgcg
acagtggcatggaagaaggtcgtctttgccgcctggtctggtagtgcgcgcaatgaaact
gcgaggggtatctgggtgtaccagcgcggcaagaaggtcgccgagctggagctgccgcag
ggtggcatcgagaagatcagcagactcgtagtaatgggcgagtggattgtaggctgtgga
gccaacaaggtcgacgtctggaagacagccacgctggagcattacaccaccttgcacggc
gcatcgtcgagcaacttgtctggctgcatctgcaatatgccgacgtatctgaataagatc
ttccttggccagcaggatggctcagtcgagatatggaatctgagcaccggaaagctgctc
tacacgctcctgccgcctgccgccgacttcggtgccgtcaccgcaatgcagccgacgccc
gctctgccgctcctcgcaatcgcataccgatcagggcccgtcacgatccacaatatacgc
acggataaggaagtcatgcgcttgaacactggaggctcgcagaagttgccggtgacgtcc
atcaccttcaggacggatggcttgggggctggcgacgacggccgtgaagatggtgtcatg
gccacttcgagcagtgagagcggtgatatcactttctgggacctgaacaagggcgggcgc
aaaatgggcacactgcggggagctcatagtccaccgccatccgctagtggtggcgttggt
ggcggcatcagcaaggtcgagtttctcgctggccaggcagtcatcgtttccagtggtctt
gacaactctttgaagagctggatcttcgatgagacccccttctcgccccttcctcgtatt
ctgcattcacgtggtggacacgctgctccagtttcgaccctgcgtttcttgccttcgaat
tccgatggctctgatgatactggcaaatggctgctcagcgcaagccaggaccgtagcctg
tggggatggagcttgcgacgtgatgggcaaagcacagagctgagccagggtgcaatccag
aagaaggcgaagaagacgggtctgctgaatggcaatgccgaaggctcaaggcaccacgcg
aagctggaggaccttaaagccccgaccatcacgtgcatggcctgttcgctcaaccgtgat
ggtggcatgggggcaatgcccggcgttactggcatctggaacaactcgtccaaggtgaaa
gggcaagacaaaaaggcctcagaggtcagcatgactggctgggagagcattgtcactggt
catgccggcgacaagacggcgagaacatggttctggggacgcaagcgggcaggcaggtgg
gcttttgacaccagtgacggtagtccagtcaagagtgttgcaatttcggcttgtggtaca
tttgcgctaattggttctactaatggagcaattgacatgtacaatctgcaatctggacaa
caccgacgaaggttcccggcacgcttgacgcccgccgaggcaaagaagtacaagttgcaa
caactgcaagccgaggacagtacgcttggaacggacatggaactcccccggaagtttgcc
aagggcgaaggcaagcacaagggatcagtcactggtctcgccgtggatggtctaaatcga
accgtcatcagcagttcggatgatggcaaagtcaagttctgggacttcactacgggtacc
ttgctccatgagattgattggtacccaatgactaaggttttcggtctacgataccaccac
aatagcgacctagtagctttgagctgcgacgacggctcaatacgtgtccttgatatcgaa
acaaagaaactcattcgtgagctatgggcttcccgctcacatgcagagctgcagacgctc
gattacaatttttcaaacgatggtcggtggattgtctccgcagcatcagattcgacgatc
agggtgtgggaccttcccactggccacctcatcgatgcaatgaaattaccaaagaagtgc
aacaccgtcgctttctcgccttcaggtgagttcctcgccacaggtttggacgatgaagtt
ggtgtgcatatctggaccaatcgaaccctgttcacacacgtctcaacccggcaaatcaag
gaggaagagattgccgccgtcactgcacccactgcgtctggcgaaggtggcgtggctgtc
gtcgaagccgctgcggaagaatctgacgaagaagaatttgatgaaactacagttcccgtc
atggatcagctgagtgacaacatcacgacacttagtcttgtacccaaatcgcgttggcag
actctgctacacctcgacgtgatccgtgcgcgtaataagccaaaggaggcaccgaaggct
ccagaaaaggctcctttcttcctgcctgctgtaggtcaagacaagacttcgactacagac
aacgctttggcacctcttagtaaagatccggcttcccgcatctccagttccgccttgact
tcgcgatcatcagctgcgacggcgacaaacgactttacacgccatcttgccctcgcggcc
gtcacggctgagtacactactctactcacctacctttcgtcccttccgccatctgcggca
gacattgcaattcgtactcttgatacgacagagccatataccgagctccgaacctttatt
caagcgctctccgcgaggctacaggaacggagagactacgagcttgtgcaagcatggatg
agtgtattcctaagactacatggcgatgtcgtcgtccaagagtcggatcttgtcaacgag
ctgaagaagtggcaagacgaagcaaaacgcgagagggaaagggttggtggactagtcggt
tacagcgtgggtgtggtaggctgggtgagaagcgctcgatag
DBGET
integrated database retrieval system