Parastagonospora nodorum: SNOG_08695
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Entry
SNOG_08695 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pno
Parastagonospora nodorum
Pathway
pno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOG_08695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_08695
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SNOG_08695
mRNA degradation factors
5'-3' decay
Decapping complex
SNOG_08695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
5975903
NCBI-ProteinID:
XP_001799004
UniProt:
A0A7U2I0R7
Q0UHR9
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSFFGFDTNMPRDRGHAANAPGFGQHDAFAGLSSGGAGDDDVIDFEETYDGLGNRLDDAD
DAFNDDTFGGPPIQQSVDKHFDFAGQTSKVSNILQEEQMLFQARQGHPQQQYKPPVPQAS
KPNRSGYESYKDPEYIPQLEARADIWGLKPKQQAQPSHHEPQRQSHSPAPQAVPARKLMS
LDEVEAMMRAQSIGNEPRGAPPMQHQMQQHQMQYQGPPPGYSPQQFPHGQPPFPGMQGGP
PGQYAPQILQRPQQHQQHQPHPQQSQHQASQRQQQMRAELPAQPVHPQAPQQPTILQRQK
PQANEPSAQQQRQTPTPQTQAQGPPTQPRQILQNPNRLAGQGQPMAQPGQQAQRGQGQGH
NRGPSFPGMVITHPEQLLQLSEAERAAFLEEDAKRAKRNHKIAQLAKDNGLMTPQDKNFI
TRIQLQQLMTATGNLDERGPEAAIAEDFYYQVFSQIRGAPRQNPQQPASQFAQTYLFQTN
NRFGARRNGRGGDNHMQRMEQQIQRAVEAAKARPKARQLVVEGSLGKIAFSNSKTPRPLL
NIKRSEAGQKQPKSTIADRKEALRNIENVYVTLMQMEDHERAMPPPINPDSNPEAIQAHM
EWRSKIDTLHQQLWQNTKIMEPLNPNAAAPHPFISILSHAKGKKAVPRLFRHIDEQERIT
VVTMIVVHLDQLSVVNQAIALPEEPLNPAVREEVELFSATVLPPLFAHMSESPLNIIIGL
LGLILDRTNLHVVARSKIGLSLLTILISRAELLKQSAPETANAEWEQWNVLYNRLFDSVE
PVLPFLFPGSINETDDMYIWQYLAAMGVGASPEQQQRLVLGVKDRVMETVNVSKALPTDM
ASARLANVNLFMRAIGLDVELLG
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcttcggcttcgacaccaacatgccacgtgaccgcggtcacgcggccaatgcg
cccgggttcggccagcacgatgctttcgctgggctgagcagtggaggggcaggcgatgat
gatgtcatcgactttgaagagacgtacgatggcctcggcaaccgcctcgatgatgccgac
gacgccttcaacgacgacacgtttggagggcctcccatccagcagtccgttgacaagcac
ttcgacttcgccggccagacttccaaggtctccaacatcctgcaggaggagcagatgctc
ttccaggcccgccaaggccacccccagcagcagtacaagccgccagtcccgcaagcttcg
aagcccaacaggagtggctacgagagctacaaagaccccgagtatatccctcaattggag
gcccgcgcagacatctggggtctcaagcccaagcagcaagctcagccaagccaccatgag
cctcagcgccagtcacactcccccgcacctcaagccgtcccagcccggaagttgatgagc
ttggatgaggtcgaggctatgatgcgcgctcagagcatcggcaacgagccgcgtggcgct
ccgcctatgcagcatcagatgcaacagcaccaaatgcagtatcagggtcctcccccaggc
tattcgccacagcagttcccccacggacagccgccgttccctggcatgcagggtggtcca
ccgggccaatatgcgccccagatcctacagaggcctcaacagcatcagcagcaccagcct
cacccccagcaatcacagcatcaagcttcgcagagacagcagcagatgcgtgcagagcta
cctgctcaacccgtccacccccaagcacctcagcaacctactattctgcagcgacaaaag
ccccaggcaaacgagccaagcgcccagcaacaacgccagacccccacacctcagacccaa
gcgcaaggtcctccaacccagcctcgacagatcctccagaaccctaaccgtcttgctgga
cagggtcagccgatggcccagcctggccaacaagctcaacgaggacaggggcaaggacac
aaccgcggtccgtctttccctggcatggtcatcactcaccccgagcagctgcttcaactt
tccgaagctgaacgtgccgccttcctcgaggaagacgccaagcgcgcaaagaggaaccac
aagattgctcagcttgccaaggataacggcctcatgacaccacaggacaagaatttcatt
acccgtattcagctgcagcaattgatgactgcgactggtaatctagatgagaggggtccc
gaggctgccatcgccgaggatttctactaccaggtcttcagccagatccgcggtgctcct
cgccagaacccccagcaacctgcaagtcaattcgcgcagacgtatctgttccagaccaac
aaccgcttcggtgcacgacgaaacgggcgtggaggtgacaaccacatgcagcgcatggag
cagcaaattcagcgcgctgttgaggctgccaaagctcgaccaaaggccagacagcttgtc
gtggaaggttcattgggcaagattgccttcagcaactccaagacgccgaggccgcttctc
aacatcaagcgttccgaggctggccaaaagcaacccaagtccaccatcgctgatcgaaag
gaagctttgcgcaatatcgagaacgtttatgttactctaatgcagatggaagaccacgag
cgtgcaatgccaccaccaatcaacccagacagcaacccagaggctatacaggcacacatg
gagtggcgatcgaagatagataccctccatcaacagctatggcagaacacgaagatcatg
gagcctctcaacccgaacgccgctgcacctcatccgttcatatccattctttcacacgcg
aaaggaaagaaggcagttcctcgcctcttccgacacatcgacgaacaggagcgaataaca
gtcgtgactatgattgtcgtccaccttgaccagctttccgtggtcaatcaagcaatcgcc
ttaccggaagaaccattgaatcctgctgtacgcgaggaagtcgagcttttctcggccaca
gtcctgccaccactcttcgcacacatgtccgagtcgccacttaacatcatcattggcctt
ctgggacttatcctcgatcgcacaaacttgcacgtggttgcccgcagcaagatcgggctt
tctttgctcacaatcttaatctctcgtgccgagctcctgaagcagtctgccccagagaca
gccaacgctgagtgggagcagtggaacgtgctatacaaccgacttttcgactcagtcgag
cctgtgctcccattcctgttccctggaagcatcaatgagactgacgacatgtacatttgg
caatacttggcagccatgggagttggagccagccctgaacagcaacagagacttgtactt
ggtgtcaaggatcgcgtcatggagacagtcaacgtcagtaaagctttgccaactgatatg
gcaagtgctcgtctggctaacgtcaacctcttcatgagggccattggattggacgtggag
cttcttggatga
DBGET
integrated database retrieval system