KEGG   Parastagonospora nodorum: SNOG_08695
Entry
SNOG_08695        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
pno  Parastagonospora nodorum
Pathway
pno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SNOG_08695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pno03019]
    SNOG_08695
Messenger RNA biogenesis [BR:pno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SNOG_08695
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     SNOG_08695
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 5975903
NCBI-ProteinID: XP_001799004
UniProt: A0A7U2I0R7 Q0UHR9
LinkDB
Position
Unknown
AA seq 863 aa
MSFFGFDTNMPRDRGHAANAPGFGQHDAFAGLSSGGAGDDDVIDFEETYDGLGNRLDDAD
DAFNDDTFGGPPIQQSVDKHFDFAGQTSKVSNILQEEQMLFQARQGHPQQQYKPPVPQAS
KPNRSGYESYKDPEYIPQLEARADIWGLKPKQQAQPSHHEPQRQSHSPAPQAVPARKLMS
LDEVEAMMRAQSIGNEPRGAPPMQHQMQQHQMQYQGPPPGYSPQQFPHGQPPFPGMQGGP
PGQYAPQILQRPQQHQQHQPHPQQSQHQASQRQQQMRAELPAQPVHPQAPQQPTILQRQK
PQANEPSAQQQRQTPTPQTQAQGPPTQPRQILQNPNRLAGQGQPMAQPGQQAQRGQGQGH
NRGPSFPGMVITHPEQLLQLSEAERAAFLEEDAKRAKRNHKIAQLAKDNGLMTPQDKNFI
TRIQLQQLMTATGNLDERGPEAAIAEDFYYQVFSQIRGAPRQNPQQPASQFAQTYLFQTN
NRFGARRNGRGGDNHMQRMEQQIQRAVEAAKARPKARQLVVEGSLGKIAFSNSKTPRPLL
NIKRSEAGQKQPKSTIADRKEALRNIENVYVTLMQMEDHERAMPPPINPDSNPEAIQAHM
EWRSKIDTLHQQLWQNTKIMEPLNPNAAAPHPFISILSHAKGKKAVPRLFRHIDEQERIT
VVTMIVVHLDQLSVVNQAIALPEEPLNPAVREEVELFSATVLPPLFAHMSESPLNIIIGL
LGLILDRTNLHVVARSKIGLSLLTILISRAELLKQSAPETANAEWEQWNVLYNRLFDSVE
PVLPFLFPGSINETDDMYIWQYLAAMGVGASPEQQQRLVLGVKDRVMETVNVSKALPTDM
ASARLANVNLFMRAIGLDVELLG
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgtcgttcttcggcttcgacaccaacatgccacgtgaccgcggtcacgcggccaatgcg
cccgggttcggccagcacgatgctttcgctgggctgagcagtggaggggcaggcgatgat
gatgtcatcgactttgaagagacgtacgatggcctcggcaaccgcctcgatgatgccgac
gacgccttcaacgacgacacgtttggagggcctcccatccagcagtccgttgacaagcac
ttcgacttcgccggccagacttccaaggtctccaacatcctgcaggaggagcagatgctc
ttccaggcccgccaaggccacccccagcagcagtacaagccgccagtcccgcaagcttcg
aagcccaacaggagtggctacgagagctacaaagaccccgagtatatccctcaattggag
gcccgcgcagacatctggggtctcaagcccaagcagcaagctcagccaagccaccatgag
cctcagcgccagtcacactcccccgcacctcaagccgtcccagcccggaagttgatgagc
ttggatgaggtcgaggctatgatgcgcgctcagagcatcggcaacgagccgcgtggcgct
ccgcctatgcagcatcagatgcaacagcaccaaatgcagtatcagggtcctcccccaggc
tattcgccacagcagttcccccacggacagccgccgttccctggcatgcagggtggtcca
ccgggccaatatgcgccccagatcctacagaggcctcaacagcatcagcagcaccagcct
cacccccagcaatcacagcatcaagcttcgcagagacagcagcagatgcgtgcagagcta
cctgctcaacccgtccacccccaagcacctcagcaacctactattctgcagcgacaaaag
ccccaggcaaacgagccaagcgcccagcaacaacgccagacccccacacctcagacccaa
gcgcaaggtcctccaacccagcctcgacagatcctccagaaccctaaccgtcttgctgga
cagggtcagccgatggcccagcctggccaacaagctcaacgaggacaggggcaaggacac
aaccgcggtccgtctttccctggcatggtcatcactcaccccgagcagctgcttcaactt
tccgaagctgaacgtgccgccttcctcgaggaagacgccaagcgcgcaaagaggaaccac
aagattgctcagcttgccaaggataacggcctcatgacaccacaggacaagaatttcatt
acccgtattcagctgcagcaattgatgactgcgactggtaatctagatgagaggggtccc
gaggctgccatcgccgaggatttctactaccaggtcttcagccagatccgcggtgctcct
cgccagaacccccagcaacctgcaagtcaattcgcgcagacgtatctgttccagaccaac
aaccgcttcggtgcacgacgaaacgggcgtggaggtgacaaccacatgcagcgcatggag
cagcaaattcagcgcgctgttgaggctgccaaagctcgaccaaaggccagacagcttgtc
gtggaaggttcattgggcaagattgccttcagcaactccaagacgccgaggccgcttctc
aacatcaagcgttccgaggctggccaaaagcaacccaagtccaccatcgctgatcgaaag
gaagctttgcgcaatatcgagaacgtttatgttactctaatgcagatggaagaccacgag
cgtgcaatgccaccaccaatcaacccagacagcaacccagaggctatacaggcacacatg
gagtggcgatcgaagatagataccctccatcaacagctatggcagaacacgaagatcatg
gagcctctcaacccgaacgccgctgcacctcatccgttcatatccattctttcacacgcg
aaaggaaagaaggcagttcctcgcctcttccgacacatcgacgaacaggagcgaataaca
gtcgtgactatgattgtcgtccaccttgaccagctttccgtggtcaatcaagcaatcgcc
ttaccggaagaaccattgaatcctgctgtacgcgaggaagtcgagcttttctcggccaca
gtcctgccaccactcttcgcacacatgtccgagtcgccacttaacatcatcattggcctt
ctgggacttatcctcgatcgcacaaacttgcacgtggttgcccgcagcaagatcgggctt
tctttgctcacaatcttaatctctcgtgccgagctcctgaagcagtctgccccagagaca
gccaacgctgagtgggagcagtggaacgtgctatacaaccgacttttcgactcagtcgag
cctgtgctcccattcctgttccctggaagcatcaatgagactgacgacatgtacatttgg
caatacttggcagccatgggagttggagccagccctgaacagcaacagagacttgtactt
ggtgtcaaggatcgcgtcatggagacagtcaacgtcagtaaagctttgccaactgatatg
gcaagtgctcgtctggctaacgtcaacctcttcatgagggccattggattggacgtggag
cttcttggatga

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