Parastagonospora nodorum: SNOG_09202
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Entry
SNOG_09202 CDS
T01161
Symbol
SNOG_09200 SNOG_09201
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pno
Parastagonospora nodorum
Pathway
pno03013
Nucleocytoplasmic transport
pno03015
mRNA surveillance pathway
pno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SNOG_09202 (SNOG_09200 SNOG_09201)
09122 Translation
03013 Nucleocytoplasmic transport
SNOG_09202 (SNOG_09200 SNOG_09201)
03015 mRNA surveillance pathway
SNOG_09202 (SNOG_09200 SNOG_09201)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_09202 (SNOG_09200 SNOG_09201)
03041 Spliceosome [BR:
pno03041
]
SNOG_09202 (SNOG_09200 SNOG_09201)
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
SNOG_09202 (SNOG_09200 SNOG_09201)
Spliceosome [BR:
pno03041
]
Common components
Common spliceosomal components
Cap binding complex
SNOG_09202 (SNOG_09200 SNOG_09201)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
Motif
Other DBs
NCBI-GeneID:
5976402
NCBI-ProteinID:
XP_001799501
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MSGIGNAASDGYADLLGLGMDCEFVAPDGQVLMGGPDMSQHGAAAIPLVDDEPMEVEMRK
EPTSVRPEHPNSASFDEQARRTLDFSDTAPRPIRAPRSIRNNHYRSSNPHRQGDYYKPKP
YRDLDAVAGRVHDFDRQNRDPSPETARNQGEAIFVSAMADVDVKEERDDRRDGDRYRGGG
QNKRRRDGKLATAWPWMVAKLTMRPIEIAKIFAENFDDERLSPFKIPFVAAVALYGNEVK
PEIAIEAMKRRQALNAGEWKEFKQFLRFFACLQPLFEDDGIFTLLGQLFDTVVDLQSANE
NDVVGIELVKIILLTIPYAIVSGGSRFHEQAQQLLKNTGIVAGNMVPIEGLIHSYVGDED
AKPMGYHSVIGLLQAQLSTEAENGFELACLPRFEADALSRTKEKAEDESMPAAPQTHAFP
AFTIPSPVNPGLKPIFPEAYFSLFADQEGSTVPKTSEIASSLIRDAIVDTVNQLDFNREM
VAKFLRGTPFDKFKDVIGDKIQYKPEDMVIDAIFSQLFKLPSAEHKLVYYHSLITQCCKV
APAAIAPSLGRAIRTVYKSLPMLDLELGYRFLDWFSHHLSNFEFRWRWTEWLDNLELSNL
HPQKAFILAALDKEMRLSFAKRIRSTLPDQMHALIPERLDADNSPDFKYDNQQTPYAAEG
QTLLAQLRKKASAEDMQATIDKIHEKALEQGIAEVLVPSTDAFVTAICRLGAKSLSHVLS
CIERGKDRLLEISQNEVARRQIVASVVEYWKDQPGVAVRIIDILLNYTILAPMTVVQWVF
GSHMGAGEALTESWVFEMVSNTVAKVTNRNRQIASARLQKGLPDEQVPMVEATLAKDRDN
ARELFKYIEDSTRGVEEGSADVLIEKQSSGALTEEEVNLIRAWGKRWHSVFIRKAAVEEA
IVGEEAVEARIKLLAAEPGVPETMETDGNGTNGESEMTEI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtataggtaatgctgccagtgatggctatgcagatctacttggactgggcatg
gactgtgaattcgtagctccagatggtcaggtattgatgggtggacctgacatgtcacag
catggcgcggctgcaattccactggttgatgatgagccgatggaggttgagatgcggaaa
gagccaacgtccgtgcgtccagagcacccaaatagcgctagcttcgacgagcaagctcga
aggaccctcgacttctccgacacagctccacgacccatcagggcgccccgttctatacgc
aacaatcactaccgtagctccaatccgcatcgacagggcgactattataagcccaagccc
taccgcgaccttgacgccgttgctggacgcgtccacgatttcgatcgccagaaccgagac
ccttcaccggagaccgctcgcaaccagggagaagccatctttgtttcagctatggcggac
gtagatgtgaaggaggagcgcgacgaccgacgcgacggagatcgttaccgtggtggagga
cagaacaagcgccggcgcgatggtaagcttgcgaccgcatggccctggatggtcgcgaaa
ctaacgatgaggcccatcgaaattgcaaagatctttgcagagaactttgacgatgagagg
ctcagccccttcaagatcccattcgttgccgccgtagcactttacggcaacgaggtcaag
ccagagattgcgattgaggccatgaaacgtcgtcaagccctcaatgctggcgagtggaag
gagttcaagcaattcctcaggttcttcgcctgtcttcagccgctcttcgaggacgatggc
atcttcacgctcctgggtcagctgttcgacactgtggttgatcttcagagcgcgaatgag
aacgacgttgttggcatcgagcttgtcaagatcatcctcctcaccattccctatgcgatc
gtttctggtggcagccgcttccacgaacaagcacaacagctgctgaagaacactggcatc
gtagcaggcaacatggtccccatcgaaggcctgattcattcatatgttggcgacgaggac
gcgaagcccatgggttaccatagcgttatcggtctactgcaagcacagctatcaactgaa
gcagagaacggtttcgaacttgcctgtctgccacgtttcgaagcggatgccctgtcgcgg
acgaaggagaaggcagaggacgagtcgatgccagccgcgccacaaactcatgcattccca
gctttcaccatcccctcacctgtgaacccaggcttgaagccgatctttcctgaggcctac
ttttcgctcttcgccgaccaggagggttccacggtcccgaagacgtccgaaattgcctca
tcactcatccgcgatgccattgttgatactgtcaatcagctcgacttcaaccgcgagatg
gtcgccaaattcctgcgtggaacgcccttcgacaagttcaaagatgtcataggagacaaa
atccagtacaagccggaagatatggtcatcgacgccatcttttcgcagctgttcaagcta
cccagtgctgaacacaaactcgtgtactatcattcactcatcacacaatgctgcaaggtc
gcacctgctgccatcgcgccctcactaggacgagctatccgcacagtctacaagagcctg
cccatgctagatcttgaactgggctaccgattcctcgactggttttcccaccacttgagc
aatttcgagttccgatggaggtggacagaatggcttgacaaccttgagctttcgaacctg
cacccacaaaaggctttcattcttgcggcacttgacaaggagatgcgtctgtccttcgca
aagcgcatccggtctaccttgccagatcaaatgcatgctctgatccctgagcgacttgat
gctgataacagcccggatttcaagtatgacaaccagcaaacaccttatgctgccgagggc
cagactctgcttgctcagctcaggaagaaggcctccgcagaggacatgcaagccaccatc
gacaagatccatgagaaggcattggagcagggcattgctgaagtcctggttccctctacc
gatgccttcgttaccgccatctgccgtcttggtgccaagtcgctctctcacgtgctctct
tgcattgagcgaggtaaggaccgcctgctagagatctcgcaaaacgaggttgcgcgccgc
cagatcgttgccagtgtcgtcgagtactggaaagatcagccaggtgttgccgtccggatt
atcgacattctgctcaattatacgatacttgcgccgatgaccgtggttcaatgggtattt
ggcagccacatgggcgctggtgaagcacttacagagagctgggtcttcgaaatggtgtca
aacaccgtggctaaggtcacgaaccgcaaccgccagatcgcttcggcgcgtcttcaaaag
ggtctgcccgatgaacaggttcccatggttgaggctacacttgccaaggatcgcgacaat
gctcgcgagctattcaagtacatcgaggactccacccgtggcgttgaggagggttcagcc
gatgttctgattgagaagcaatccagcggcgcgctcaccgaagaggaggtcaatctcatc
cgtgcctggggcaagcgctggcattcagtcttcatccgtaaggcggcagtcgaagaagca
attgtcggtgaagaagcggttgaggctaggatcaagctacttgctgctgagcctggcgta
ccagagaccatggagacagatggtaacggcactaacggtgagtcggaaatgactgagatc
tag
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integrated database retrieval system