Parastagonospora nodorum: SNOG_09475
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Entry
SNOG_09475 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pno
Parastagonospora nodorum
Pathway
pno03022
Basal transcription factors
pno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SNOG_09475
09124 Replication and repair
03420 Nucleotide excision repair
SNOG_09475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pno03021
]
SNOG_09475
03036 Chromosome and associated proteins [BR:
pno03036
]
SNOG_09475
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_09475
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SNOG_09475
Transcription machinery [BR:
pno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SNOG_09475
Chromosome and associated proteins [BR:
pno03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SNOG_09475
DNA repair and recombination proteins [BR:
pno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SNOG_09475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
5976672
NCBI-ProteinID:
XP_001799767
UniProt:
Q0UFI9
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MSEIEKALAELKNLMKYRTKELGYEEEFRGLGLTSRKNLCLHPTVKREKSGTVVDSKCRS
LTAGFVKEKKERGEDVDLCVYHDNLDLLEPHNLVPPGVFTFDGLLKYGEKHKQCPYFSAR
RMMAYCNVIIYSYHYLLDPKIADRVSKELSKDCIVVFDEAHNIDNVCIESLSIDITEDSL
RKATKGVNNLDRKITEMKTTDAEKLQSEYAKLVEGLRTADEARQEDTFMANPALPDDLLT
EAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLHVISETPPSFLQHLRDLTFIEKKPLRFCA
ERLTSLVRTLELTNIEDYQPLQDIATFATLVATYETGFLLILEPFESATATVPNPVLHFT
CLDAAIAIKPVFERFYSVIVTSGTMSPLDMYPRMLNFNTVVQESFTMTLTRKTFLPMIVD
RGNDQNQITSQFEHRNDLQVQRNFGTLLIEFCKLTPDGVVVFFPSYLYMESIISAWQGME
ILDTVWKYKLILVETPDAQETALALETFRTACNNGRGAVLLCVARGKVSEGIDFDHHYGR
TVLCMGVPYQYTESRILKARLEFLRETYRIKESDFLSFDAMRHAAQCLGRVIRGKDDYGI
MVLADKRFNKKVTQLPKWIQQGLEAKSTKLSIDQAVGNAKAFLKDMSKPWSRKEGEGHSS
WSYEDLRAHQKKREQLAISGTDNASMRALEGRAEKEKVEDDGDEFGGEGMDALMVDADAD
ADLR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagatcgagaaggcactcgccgagttgaagaacctgatgaagtaccggacgaaa
gagctcggctacgaggaagagttcagaggacttggtctgacaagtcgaaaaaacctgtgt
ttgcatccgactgtcaagcgcgagaagagtggcaccgttgtcgactccaagtgcagaagc
ttaacggcaggcttcgtcaaagagaagaaagagcgtggcgaggatgtggatctatgtgtt
taccacgacaatctagatctactggagccgcacaacttggtacctccaggcgtctttaca
ttcgacggactactcaagtacggcgagaaacacaagcaatgtccatacttctcggcgcga
cgcatgatggcctactgcaacgtcatcatctactcataccattacctgcttgaccccaag
attgcggatcgcgtatcaaaggagctttccaaggattgtatagtagttttcgacgaagcc
cacaacatcgacaacgtatgcatcgaatctctcagcatcgacatcaccgaggactcatta
cgaaaggcaaccaagggtgtcaacaacctggatcgcaagatcaccgagatgaaaaccact
gacgctgagaaattgcaaagcgaatatgcaaagttagtcgaaggcctcagaacggcagac
gaagcacggcaagaggacacattcatggcgaatccggcattacccgacgatctactcaca
gaagctgtaccaggcaatatacggcgagcagagcattttgtagccttcctcaaacggttc
attgagtacctgaagacccgtatgaaggttctccacgtcatctccgaaacacctccatcc
ttcctgcagcatctccgtgatctcactttcatcgagaagaagcctttgcgattctgcgcc
gagcgcttgacttctctcgtacggacgctcgaactcacaaacatcgaagactatcagccc
ttgcaggatattgcgacgttcgcaaccctagtcgcgacatacgagacgggcttcctgttg
attcttgagccatttgaatcagccactgcaacggtgccgaatccagtcctgcacttcacg
tgcttggatgccgccatcgccataaagcccgtattcgagcgcttctactccgtcatcgtc
acatcaggaaccatgagtcccctagacatgtacccgcgcatgctcaacttcaacaccgtc
gtgcaagaatccttcaccatgacactaacccgcaagaccttcctccccatgatcgtcgac
cgcggcaacgaccaaaaccaaataacctctcaattcgagcaccgcaacgacctgcaagtc
cagcgcaacttcggcacgttgctcatcgaattctgcaaactcactcccgatggcgtcgtc
gtcttcttcccttcctacctttacatggagtcgattatttccgcctggcaaggcatggaa
atcctcgacacggtgtggaaatacaaactcatcctcgtcgaaacccccgacgcccaggaa
accgccctagcactcgagaccttccgcaccgcctgcaacaacggccggggcgccgtcctc
ctctgcgtcgcgcgcgggaaagttagtgaaggcattgattttgaccatcactacggccgc
acggtgctgtgtatgggcgtgccgtaccaatacaccgaaagccgcattttaaaagcgcgg
ctcgaattcttgcgcgaaacataccgcattaaagaatctgacttcctctccttcgacgcc
atgcgccacgccgcacaatgcctcggccgtgtcatccgcggcaaagacgactacggcatc
atggtgctggccgacaagcgcttcaacaagaaagtcacacagctgccgaaatggatccag
cagggcctcgaggccaaatccacgaaactgtccatcgaccaggctgtggggaatgcgaag
gcattcctcaaggacatgagcaagccgtggagtcgcaaggagggcgaagggcatagttcg
tggagctacgaagatttgcgcgcccatcagaagaagcgcgaacaactcgcaatcagcggc
acggacaatgctagtatgcgcgcgctggaaggcagggcggagaaggagaaggtcgaggac
gatggggatgagtttggcggagagggtatggatgctctcatggtggatgcggatgcggat
gcggatcttaggtag
DBGET
integrated database retrieval system
