KEGG   Parastagonospora nodorum: SNOG_10106
Entry
SNOG_10106        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
pno  Parastagonospora nodorum
Pathway
pno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SNOG_10106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pno03019]
    SNOG_10106
   03036 Chromosome and associated proteins [BR:pno03036]
    SNOG_10106
Messenger RNA biogenesis [BR:pno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SNOG_10106
Chromosome and associated proteins [BR:pno03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     SNOG_10106
    COMPASS/SET1 complex (yeast)
     SNOG_10106
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_SPT8 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 5977294
NCBI-ProteinID: XP_001800388
UniProt: Q0UDQ8
LinkDB
Position
Unknown
AA seq 357 aa
MAVGSATPGAPPPPAGPPTQKRFKPPSPGTASVTSLDFDDTGELAIVARDDDTLQIYNCK
EGKHAKELKSQKYGVHLARFSHHAQSIIYASTKVDDTIRYLSTHDNSYIRYFKGHTDTVT
SISLCPSSDTFLSCSRDNTVRLWSLSSPNYHGLLNLQGAYLAAYDPSATVMAIASPSTQT
VLLYDVRNFDKPPFATWDMQELEQRFLGREKGEWTKIEFSNDGKNLLIATNGSGHFILDA
FSGEITHFCYRKAGSSGRLSAGATSLSHMANGHAPVVGQGDVCLSPDGQYLIGGSSEDGL
LVWDISKPPSPNNSLEPIEKLPGHGKSAIVGYNPRTNLIASADKDLYLWQPDSDLMV
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggcagttggatcagcaactccaggcgcgccgcctccgcctgctgggcctccgacgcag
aagcgcttcaagcctccgagtccgggtacagcatccgtcacatccctcgacttcgacgac
acgggcgaactagccatagtagcgcgcgacgacgacaccctccagatctacaactgcaag
gaaggaaaacatgcaaaagagctgaagagtcagaaatatggcgtacatcttgcgcgcttt
tcccaccatgcgcagagcatcatctacgcaagtacaaaagtcgacgatacaattcgctac
ctctccacacacgacaactcctacatacgctacttcaagggccacaccgacaccgtgaca
tccatctcgctctgtccctcctcagacacattcctctcctgctcccgcgacaacactgtg
cgcctatggagtctctcatcacccaactaccacggcctgctaaacctccaaggcgcctac
ctcgccgcctacgacccctccgcaaccgtcatggccatcgcctcaccttcgacacaaacc
gtactgctctacgacgtgcgcaactttgacaagccgccgttcgcgacgtgggacatgcag
gagcttgagcagcgcttcctgggccgcgagaagggcgagtggacgaagatcgagttctcg
aacgatggcaagaatctgctgatcgcgacgaatggaagtggccatttcatactcgatgcg
ttttcgggcgaaatcacgcacttttgttaccgcaaggcgggttcgtcgggacgcttgtcg
gctggcgcgacgagtctgagtcacatggcgaatgggcacgcgccggtggttgggcagggc
gatgtatgtctgtcgccggatgggcagtacttgatcggtgggagtagcgaggatgggctg
ctggtatgggatatttcgaaaccgccgtcgccgaataatagtctcgagccgattgagaag
ttaccggggcatgggaagagcgcgattgtggggtataatccgaggacgaatttgattgcg
agtgcggataaggatttgtacttgtggcagccggactcggatttgatggtttga

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