Parastagonospora nodorum: SNOG_10143
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Entry
SNOG_10143 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pno03012
]
SNOG_10143
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SNOG_10143
Translation factors [BR:
pno03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
SNOG_10143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSRM_DHX29
OB_NTP_bind
RWD
HA2_C
DEAD
HA2_N
AAA_22
UBA_DHX29
Helicase_C
nSTAND3
DND1_DSRM
ATPase
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
5977331
NCBI-ProteinID:
XP_001800425
UniProt:
Q0UDM1
LinkDB
All DBs
Position
Unknown
AA seq
1342 aa
AA seq
DB search
MPKNAHPPRGKPAKKTVPPEEDTSYIVFGDGKPKKKKPDNSNTGTSSEDTKGKGKAATGP
AEDGPKKPDTRTLIAGVSWTGKLPVNLLAEHFQKQHWSKPDYRIRKDGEKHFAYAVVLSK
LNQKTREVTTLPQIKIPAELEEKAHQPSAVEARNFAAAYTLFRVASAKNLHMMLPPTYKD
LWKGEFTELKKRDEAEGKGWMYEADPFFGFAEREKARELAAKAREKKQKERDEAQKAHNL
QPGAAMPSSRSSSAGGRNLLKGWERVPKIELGKRTRKAAEHLIRRDAVWNPNGLELDPTT
KSRLVHEIAELGFRESHVEEAAAICKDREEIIEWLLIHVPEDDLPSWSLPEGYVAGVSMA
SANLKREGAVKRLAAAGYALDLCEEAYDGQGGDERKAAALLQTRLLRPNEDDKDIAQEVA
DLSIADDTEEWSEEDAWETEMSSLEAIYDKLFSRPSPEMCRIELDIKQQGKRLILQARKP
FGLYPAVVPIITFEAAIPAYIRLSIIRQALLHAETNCIGMPMIYDIVDWVQQNSGEIFKN
PGRLSDVSSGLAAADHTEEQQVRKNNRKARGRRPIDWTPATPVSQKILSQWQAKQTMPNQ
QKMMNVRQALPAWRLREDIIRTVNDCQVTIISGETGSGKSTQSVQFVLDDLIQRQLGGVA
NIICTQPRRISALGLADRVADERCSQVGDEIGYTIRGESKQKPGVTKITFVTTGVLLRRL
QTSGGGADDVIAALADVSHVVVDEVHERSLDTDFLLVLLRQILRKRKDLKVILMSATLDA
EVFEAYFREVGPVGRVEIEGRTHPVHDFYIDDVVHFTGFNGAAMGDDGDEDKSFSANMRS
IGFGINYDLIAETVRHIDRQLGDKDGGILIFLPGTMEIDPTNVAETSITIEDIVAVIDTG
RVKETSYDPQNNMVRLAETWASRAACKQRRGRAGRVRAGDCYKLYTRNAEAKMMERPDPE
IRRVPLEQMCLSIKAMGVQDVSGFLASALTPPESTAVEGAIRLLSQMGAITDNELTALGR
HMSMIPADLRLGKLLVYGATFGCLEAALTIASVLTARSPFMSPRERDQETRNEFNRIRSS
FSNNQGDLLVDLRAYEQWSAMRSKGATTRDLRFWCQDNRLSIQTMFDIASNRTQYLSSLK
EISFIPTSYSSTNPSTHGMYTKQNNNDALLRALIAASFSPQIGRIQLPDKKFAAGIAGAV
ELDPEAREIKYFNQENGRVFVHPSSTLFSSQTFPSNAAFIAYFNKMATSKVFIRDITPFN
AFGLLMFAGRIQVDTLGRGLVVDEWIRLRGWARIGVLVSRLRGMLDRVLEGMVREPGKGM
SVREQEVVAVVRNLVERDGLDA
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaatgctcatccgccgcgcggtaagcccgcaaagaaaacagtgccgccggag
gaagatacaagctacatcgtcttcggcgacggcaagcccaagaagaagaagcccgacaac
tcaaataccggcactagctcagaagacaccaagggtaaaggcaaggctgcgacaggaccg
gctgaagatggcccaaagaagcctgacaccaggacactgatcgcgggagtttcgtggact
ggcaaattgcctgtaaatctactggcagagcacttccagaaacaacactggagcaagcca
gactatcggatacgcaaagatggcgagaagcactttgcctacgccgtggtcttgtccaaa
ctgaaccagaagacgcgagaagtgacgactctcccacagatcaagatccctgccgaactc
gaagaaaaggcacaccagccaagtgccgtcgaagcccgcaacttcgccgccgcctatacc
ctctttcgcgtcgccagtgcgaaaaatctacacatgatgctgcctccaacatacaaggat
ctatggaagggcgaattcacggaattgaagaagcgggatgaagcagaaggcaagggttgg
atgtacgaggcagacccgttctttggcttcgccgagcgagaaaaggcgcgcgaacttgcc
gcaaaagcacgcgagaagaagcagaaggaaagagacgaggcacagaaagcgcacaatctc
caacctggagcggctatgccgagttcacgaagttcttctgctggcggcaggaacttgctc
aaggggtgggagcgcgtacctaagattgaacttgggaaaaggacgaggaaggctgccgag
cacctgattcgccgagacgctgtgtggaatccgaatggtctcgaattggatcccacaact
aaatcacgccttgtgcacgaaattgctgagcttggtttccgggagagccacgtagaggaa
gctgctgccatatgcaaagatcgcgaagagatcatcgagtggttgctcatccatgtccca
gaagacgatctgccgtcatggagtttgcccgagggctatgtcgctggagtcagcatggcg
agcgccaatctgaagcgtgaaggcgctgtcaaacgtcttgcagctgcaggctatgcgctg
gatctatgcgaagaagcctatgatggccaagggggcgatgaacgcaaagcagcagcactc
ttgcagactcgacttcttcgaccaaacgaggacgacaaagatatcgcgcaagaagtggca
gacctctcaatcgccgatgatacggaggagtggtcagaggaagatgcctgggaaaccgag
atgtcgtctctggaagcaatttacgacaagctattcagtcgaccgtcaccagaaatgtgc
cggattgaacttgatatcaagcagcaaggaaagcgactcattttacaagccaggaagccc
ttcggactatatcctgctgtggtccccatcattaccttcgaagccgctattcccgcttat
attcgcctcagtatcattcgacaggctctactacatgcggaaaccaattgcataggaatg
cccatgatttatgatatcgtggattgggtgcagcagaactctggcgagatcttcaagaac
cccggccggttgagtgatgtctcatctggtctggcggcggccgaccataccgaagagcaa
caagttcgcaagaacaacaggaaagcaagaggtcggagaccgatagattggacgcctgcg
acacccgttagtcagaagatactgtcacagtggcaggctaagcaaacgatgccgaatcag
caaaagatgatgaatgtccgacaagcattaccagcctggaggctccgagaagacataatt
cggactgtcaacgattgccaggtgaccattatctcaggggagacgggctctggaaagtcg
actcagtcagtgcaattcgtcctggatgacctcatccagcgacagcttggaggtgtggca
aacatcatctgcacacaaccccgaagaatttctgctcttggccttgccgatcgtgttgct
gatgagcgatgctctcaagttggcgacgagattggatacaccattcgcggcgagtcgaag
cagaaaccaggcgtcactaagatcacattcgtcaccactggtgttctgctcagacgactg
cagacgtcgggtggcggtgccgacgatgttattgcagcactggcagatgtcagccacgtt
gtggttgatgaggtccacgagcgcagtctggacactgattttcttttggtcttgctccga
cagatcctacgcaagcgcaaagatctgaaggtgatcctgatgagcgcaactctggatgcc
gaagttttcgaggcgtacttcagagaagttggaccggtgggtcgcgtcgagatcgaaggc
cgcacacaccctgtgcatgacttctacattgacgacgtggttcacttcacaggcttcaac
ggcgctgcaatgggtgatgatggtgacgaggacaaatcattctccgccaacatgcgaagc
atcggcttcggtatcaactacgatctcattgctgagactgtccgacacatcgatcgtcaa
ctcggagataaagacggaggcatcttgatcttcctacctggtaccatggagatcgaccct
accaatgttgcggaaacttccatcaccatcgaggacatcgtggcggtcatcgataccggc
cgcgtgaaggagaccagctatgatccacaaaataatatggtgcgtctcgccgagacctgg
gcttccagagctgcatgcaagcagcgtcgtggtcgtgctggtcgtgtccgagctggagat
tgctacaaactctatacccgaaatgccgaagcgaagatgatggagcgacctgacccggaa
atccgacgagtaccactagagcagatgtgcctttcgataaaggctatgggtgttcaggac
gtctcgggcttcctcgcctcagctctcacgccacctgagagtacagcggtcgagggtgct
atcaggttgctctcgcagatgggagccattacagacaatgagcttaccgcccttggtcgg
cacatgtcaatgatacccgcagatctacgtctgggcaaattgctcgtctacggcgcgacg
tttggatgtctggaggccgcactgacgattgcatccgtgttgacagcgcgtagtcccttc
atgtcaccacgagagcgggatcaagaaacacgaaacgagttcaatcggatccggtcatca
ttttctaacaatcaaggagacctgcttgtcgacctccgtgcatacgagcaatggtccgcg
atgcgcagtaaaggcgcaaccacccgcgacttgcgcttctggtgccaagacaaccgccta
tcaatccagaccatgtttgacatcgcctccaatcggacgcagtacctctcttctctcaaa
gaaatctccttcataccaacctcctactcctccactaacccctccacccacggtatgtac
accaagcaaaacaacaacgacgcgctcctccgcgccctaatcgccgcctccttcagcccc
cagatcggccgcatccaactcccggacaagaaattcgcagctggcatagccggcgccgtc
gaactggacccagaagcacgcgaaatcaagtacttcaaccaagaaaacgggcgcgtcttc
gtgcacccgtcctccacactcttctcctcacaaacattcccatccaacgccgcgttcatc
gcgtactttaataaaatggccacaagcaaggtttttattagggatattacgccgtttaat
gcgtttggattgcttatgtttgccggaagaattcaggtggatactctgggcagggggctg
gttgttgatgagtggatacgattgagagggtgggcaaggattggtgtgttggttagtcgg
ttgcggggcatgttggatcgagtgctcgaggggatggttagggagccggggaaggggatg
agtgtgagggaacaggaggttgtggctgttgtgaggaatttggtggagagggatgggttg
gatgcgtag
DBGET
integrated database retrieval system
