Parastagonospora nodorum: SNOG_10228
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Entry
SNOG_10228 CDS
T01161
Symbol
SNOG_10227
Name
(RefSeq) hypothetical protein
KO
K11088
small nuclear ribonucleoprotein D3
Organism
pno
Parastagonospora nodorum
Pathway
pno03040
Spliceosome
pno04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SNOG_10228 (SNOG_10227)
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
SNOG_10228 (SNOG_10227)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_10228 (SNOG_10227)
03041 Spliceosome [BR:
pno03041
]
SNOG_10228 (SNOG_10227)
03032 DNA replication proteins [BR:
pno03032
]
SNOG_10228 (SNOG_10227)
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
SNOG_10228 (SNOG_10227)
Spliceosome [BR:
pno03041
]
Complex A
U1 snRNP components
Sm proteins
SNOG_10228 (SNOG_10227)
U2 snRNP components
SNOG_10228 (SNOG_10227)
Complex B
U1 snRNP components
SNOG_10228 (SNOG_10227)
U4/U6.U5 tri-snRNP components
SNOG_10228 (SNOG_10227)
Complex C
U2 snRNP components
SNOG_10228 (SNOG_10227)
DNA replication proteins [BR:
pno03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
SNOG_10228 (SNOG_10227)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
5977414
NCBI-ProteinID:
XP_001800508
UniProt:
A0A7U2I7U1
Q0UDD6
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MTSTIGIPIKLLNEAAGHIITLEITSGEVYRGKLLEAEDNMNVQLKDITVTARDGRVSHL
EQVYIRGSHVRYFIVPDMLRNAPMFRSRGTRGRGVGLARGRATVNRARASTRGGGRG
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaccatcggcatcccgatcaagctcctcaatgaggctgctggacacataatc
acacttgaaattacatctggcgaggtctaccgcggcaagctcctcgaagcggaggacaac
atgaatgtgcagctcaaagacatcacggtcacagctcgcgatggacgtgtgtcgcattta
gagcaggtctacatccggggcagccacgtacggtacttcattgtaccggacatgttgagg
aacgcgcctatgtttaggtcgagaggtacacgtggtcgcggcgttggtcttgcgcgtggt
cgtgcaactgtgaacagggcgcgcgcaagcaccaggggtggaggccgtggttga
DBGET
integrated database retrieval system