KEGG   Parastagonospora nodorum: SNOG_10228
Entry
SNOG_10228        CDS       T01161                                 
Symbol
SNOG_10227
Name
(RefSeq) hypothetical protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
pno  Parastagonospora nodorum
Pathway
pno03040  Spliceosome
pno04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SNOG_10228 (SNOG_10227)
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    SNOG_10228 (SNOG_10227)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pno03019]
    SNOG_10228 (SNOG_10227)
   03041 Spliceosome [BR:pno03041]
    SNOG_10228 (SNOG_10227)
   03032 DNA replication proteins [BR:pno03032]
    SNOG_10228 (SNOG_10227)
Messenger RNA biogenesis [BR:pno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     SNOG_10228 (SNOG_10227)
Spliceosome [BR:pno03041]
 Complex A
  U1 snRNP components
   Sm proteins
    SNOG_10228 (SNOG_10227)
  U2 snRNP components
    SNOG_10228 (SNOG_10227)
 Complex B
  U1 snRNP components
    SNOG_10228 (SNOG_10227)
  U4/U6.U5 tri-snRNP components
    SNOG_10228 (SNOG_10227)
 Complex C
  U2 snRNP components
    SNOG_10228 (SNOG_10227)
DNA replication proteins [BR:pno03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     SNOG_10228 (SNOG_10227)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 5977414
NCBI-ProteinID: XP_001800508
UniProt: A0A7U2I7U1 Q0UDD6
LinkDB
Position
Unknown
AA seq 117 aa
MTSTIGIPIKLLNEAAGHIITLEITSGEVYRGKLLEAEDNMNVQLKDITVTARDGRVSHL
EQVYIRGSHVRYFIVPDMLRNAPMFRSRGTRGRGVGLARGRATVNRARASTRGGGRG
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaccagcaccatcggcatcccgatcaagctcctcaatgaggctgctggacacataatc
acacttgaaattacatctggcgaggtctaccgcggcaagctcctcgaagcggaggacaac
atgaatgtgcagctcaaagacatcacggtcacagctcgcgatggacgtgtgtcgcattta
gagcaggtctacatccggggcagccacgtacggtacttcattgtaccggacatgttgagg
aacgcgcctatgtttaggtcgagaggtacacgtggtcgcggcgttggtcttgcgcgtggt
cgtgcaactgtgaacagggcgcgcgcaagcaccaggggtggaggccgtggttga

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