Parastagonospora nodorum: SNOG_10297
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Entry
SNOG_10297 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
pno
Parastagonospora nodorum
Pathway
pno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOG_10297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_10297
Enzymes [BR:
pno01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
SNOG_10297
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SNOG_10297
mRNA degradation factors
5'-3' decay
Decapping complex
SNOG_10297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
TetR_C_15
Motif
Other DBs
NCBI-GeneID:
5977482
NCBI-ProteinID:
XP_001800576
UniProt:
A0A7U2FDZ5
Q0UD67
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MTNTKMSLVDWLDDLCVRFIVNLPNEELQSVERICFQIEEAQWFYEDFIRPLDPNNLPSM
HLRKFSQLMFQHCPLFSAYSEELHQQAYENFLAYKTRVPVRGAIMLNQDMTHAVLVKGWK
KGAKWSFPRGKINKEETDLDCAVREVWEETGYDLQEANLVLPDEDMKKISIVMREQSMML
YVFRGVPMDTYFEPRTRKEISKIDWYKLTDLPTLRRKNQAQPQGAGPDMIKESSFYMVAP
FLGPLRAWIKQQQKLDRQRARSGAHLAPPITDDEELQAEVHATTADMIASLPPQQDDSFA
NLVARLGHQGSDALPEVSMQSQAAQSVDPAAELKRLLSVGMGMQSPPVEAPGMTAQQPQA
NPLLALFQQGNNNPSSPHHSLPRTPFDQVMSAPVQPNSPHGQHGPRPPQMHNMPPPPFPF
PPHQGMQFHGPHPHFDNGMHPHPQQQQHFMPPQHHQNNHMYQSPPQMPFQQSNGGHAVQS
QSFQASQSQTFGSHGAGPAVPPASKLPAPKLTAHTMGLLNSFKISDQQGPPSEPPRATVQ
AQTPQMAPRAQSRHVSQYQPNELASPQFQSPPINIQPVQPKPRSAQQDALLSMFRGTPPI
SSPTPEPAELSALPTTPAYVSAQLSQKSGRPQNMTLLDMFGNQPKPGGITSATVRGPVNA
PDFDTMKKNTLPASVSSRGPSPATFMPQQILKREQSVTQSPSNIQNGARNGAPPNAIEIS
DQPQTAFKPQILKRPQQGTTGMVNAPTAHAQGLLNMLKGPSPQPPAVQPASQSPASAAPT
AHAQGLLSMFKEASPQPPAAQPVMPVRQSPAPTAQAQGLLNMFKSPSPQPPAAQPAMPLR
QSPAPTAHAQGLLNMFKGPSPQPSMPVRQSPAPLAAQQPFDRRESFPTDQKNALLSLFGQ
SSTKPQSPRIPTPLQQTHSAVPRGRSPLPPTPKTTTSGIISPVSPLPEKGSQTVSPADFA
SRSRISSIGESGAAPSIVIPPTSHPIENTSGHGSTSSVSRSGNDAKSPVDKTFLLGFLED
VARRGR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatacaaagatgtcgctagttgactggctggacgacctatgcgtgcgcttcatc
gtcaatctgccgaatgaagagctgcagtcagtcgagcgaatatgcttccagatcgaagaa
gcgcaatggttctacgaagacttcatccgcccgctggaccccaacaacctgccctcgatg
cacctgcgcaagttctcgcagctcatgttccagcactgcccgctgttctcggcatactcg
gaagagctgcaccagcaggcctacgagaactttctcgcgtacaagaccagagtgcctgtg
cgcggcgcaatcatgctcaaccaggatatgacacatgcagtgctggtgaaaggatggaag
aagggcgcgaaatggagttttcctagggggaagatcaacaaggaagagaccgacttggac
tgcgccgtgcgagaggtctgggaagagactggatacgacctgcaagaagccaatttggta
ctgccggacgaagacatgaagaagatctccatcgttatgcgcgagcagagtatgatgctg
tacgtgtttcgcggtgtgcccatggatacgtacttcgaaccacggacgcgaaaggaaatc
tccaagatagattggtacaagttgacggacctgcccacccttcggaggaagaaccaggcg
caaccgcaaggtgctggaccagatatgatcaaggagagcagcttctacatggtagcgccg
tttctcggaccgctcagggcgtggatcaagcaacaacaaaaactcgacaggcagagggca
cgcagcggcgctcatcttgccccgcctattacagacgacgaggagctacaggctgaagtg
cacgcgacaacagcggatatgatcgcttctttaccgccgcagcaagatgatagctttgcg
aacctcgtcgctcgactgggccatcaaggaagcgatgctctgcccgaagtctctatgcaa
tctcaggcagcacaatctgtggatcctgcagcagaactcaaacgcctgctcagtgtaggc
atgggaatgcagtcaccgcctgtagaggctcctggcatgacagctcaacagccacaggcc
aatcctctgctggccctgttccaacaaggcaacaacaatccatccagtcctcaccattct
ttgccgagaacacctttcgaccaggtcatgtccgccccagtccagccgaacagtcctcat
ggacaacatggtcctcgaccacctcaaatgcacaacatgccgccaccaccattcccgttc
ccaccccatcagggcatgcagttccatggtcctcatccacatttcgacaatggcatgcac
ccacaccctcaacaacagcaacactttatgccgccacaacaccatcagaacaaccacatg
tatcaatcacccccacaaatgcccttccaacaaagcaatggtggacacgcagtacagtct
cagtctttccaagcttcacagtcccaaacgtttggttcacacggagccggcccggccgtt
ccgcctgcttcaaaactacctgcaccgaagctcaccgcacatacgatgggtttgttgaac
tcgttcaagatcagcgaccaacaaggaccaccttcagagcctccccgggctacagtccaa
gctcagaccccccagatggcacctcgagcacaatcgcgccatgtctcgcagtatcagcca
aacgagctggcatccccgcaatttcagtcgccgcctattaacatacagccagtgcagccg
aagccaagatccgcacaacaggatgcgttattgtcaatgtttagaggcactccgccaatc
tcgtcgcctacgccggagcctgctgagctgtctgcgctgcctaccacgccagcatatgta
tctgcacaactctcccagaagtcaggaagaccgcaaaatatgactttgcttgacatgttt
ggcaaccagccgaaacccgggggcatcacctcagctactgtacgcgggcctgtcaatgcc
ccagatttcgacacgatgaagaagaacaccctacctgccagtgtcagttcccgtgggcca
tcgccggctacgttcatgcctcaacagattttgaagcgtgagcagtcggtaacccaaagt
ccttcaaacatccagaacggcgcccgaaacggagcaccaccgaatgcgatcgagatctca
gaccagccgcagacggctttcaagccacagattctgaagcgacctcagcagggcaccaca
gggatggtaaatgcaccaacagcgcatgcacagggccttctcaacatgttaaaaggacca
tcaccacagccgcccgccgttcagcctgcttcgcaatcacctgcatcagctgcaccgact
gcacatgcgcaaggtctgctgagcatgttcaaagaagcatcaccgcaaccaccggcagct
cagcctgtaatgccggtcaggcaatcgccagcacctaccgcgcaggcacagggcctgttg
aacatgttcaaaagcccttcaccccaacctccagctgctcaacctgcaatgccgctaagg
cagtcgccagcacctacagcacacgcgcaaggtctactgaacatgttcaagggcccgtcg
ccacagccttccatgcctgttagacagtcaccagccccattagcagcacaacagcccttt
gaccgtcgagagtccttccccaccgaccagaagaacgctctgctctccctcttcggccaa
tcctcaacgaagccccagagccctcgtattcctacgccattgcaacagactcacagcgct
gtcccaagaggacgaagccctctgccaccgaccccgaagacgaccacgtccgggatcatc
agccctgtcagcccactcccagagaaaggtagccagaccgtcagccccgcagactttgcc
tctcgcagtaggatctcgagtatcggcgagtctggagcggcgccaagtatcgtcatcccg
cctacttcacatccaatcgagaacacatcgggtcacggcagtacaagcagcgtaagcagg
tctggtaatgatgccaagagcccagtcgacaagacgtttttgctaggattcttggaggac
gtagcgaggcgtgggcgttag
DBGET
integrated database retrieval system
