Parastagonospora nodorum: SNOG_10336
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Entry
SNOG_10336 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
pno
Parastagonospora nodorum
Pathway
pno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOG_10336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_10336
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SNOG_10336
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
SNOG_10336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
5977518
NCBI-ProteinID:
XP_001800612
UniProt:
A0A7U2FG27
Q0UD28
LinkDB
All DBs
Position
Unknown
AA seq
213 aa
AA seq
DB search
MALPSLALPGQLLGPTDKYLPGPGTHIHEQQIYASIAGPVVSSPSRASQTAATASKSKLV
PLLSISRPPNTTSDPGILGTGSGGGAPILPEVDSTVLARITRLGARFATCEILVIGDTVC
REAFQGQIRREDIRATEKDKIKIEESFRVGDLIRGVVISLGDQSNYYVATDRNEFGVVMA
RSEEGRLMYPVSWKEFRDPVTGKGESRKAAKPF
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggctcttccatctctagccctcccagggcagcttcttggaccaacagacaaataccta
ccgggacctggcacgcacattcacgagcagcaaatctacgcttcaatagctggacccgtc
gtatcatcaccgtcgcgcgcatcacaaaccgctgctacagcctcaaagtcaaaactcgtc
ccacttctctcgatatcacgaccgcccaacacaacgtcagatccaggaatactgggcaca
ggcagcggtggcggcgcacccatcctccccgaagtcgacagcaccgttctcgcgcgcata
acgcgtctcggcgcgcgctttgccacatgcgagatcctcgtcattggcgacaccgtctgc
cgcgaagccttccaaggtcaaatacggcgcgaagacatacgcgcgacggaaaaggacaag
atcaagattgaagagagtttccgcgtgggcgacttgatccgcggcgtcgtgatcagtttg
ggcgatcagagcaattactacgtcgcgacggatcggaatgagtttggcgtggtcatggcg
aggagcgaggagggcaggctgatgtatccggttagttggaaggagtttagggatccggtg
acgggcaagggagagagcaggaaggctgctaagccgttttga
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