Parastagonospora nodorum: SNOG_10595
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Entry
SNOG_10595 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pno
Parastagonospora nodorum
Pathway
pno03013
Nucleocytoplasmic transport
pno03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SNOG_10595
03015 mRNA surveillance pathway
SNOG_10595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_10595
Enzymes [BR:
pno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SNOG_10595
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SNOG_10595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
DUF2511
Motif
Other DBs
NCBI-GeneID:
5977767
NCBI-ProteinID:
XP_001800860
UniProt:
Q0UCB9
A0A7U2FJN4
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSATEPTKEPAKEEVAEQSTVAQAQVDGSGEPANGSPLTETEYKVEVKLADMQADPNNPL
YSAQSFEELQLSEELLKGVRNMNFRKPSKIQEKALPLLLMNPPTNMIAQSQSGTGKTAAF
SLNILSRIDLSRNEPQAIALAPSRELARQILGVITHMGQFMEGLKTMAAIPDPTKRNQRL
DAHVLVGTPGTVQEQLKRRLIKSDSIKILVLDEADNMLDQQGMGDQCTRVKSLLPKNIQT
VLFSATFPPAVINYANKFAPNSNVLTLAHEELTIEGIKQLYIDIDKDQDKYSTLLKFYGL
MTQASSIIFVRTRRTAEELERRMVAEGHKVAQLSGALEGQDRDRVIDQFRSGEAKVLITT
NVLARGIDVESVTMVINYDVPTMADGREADPETYLHRIGRTGRFGRVGVALTFVHDKASW
QQLHDIASYFKTDLHPIDTSDWDNVEEMIQKIIKSSRAGKSTKEMTEMITS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaccgaacccaccaaggagcctgcgaaggaggaggtcgcagagcagtcaaca
gtcgcgcaggcgcaagtcgatggcagcggtgagcccgccaatggctcacctctgaccgag
accgagtacaaggtcgaggtgaagctggcagacatgcaggcggacccgaacaaccctctg
tactcggctcagtcttttgaagagcttcagctgtccgaggaactgctcaagggcgtccgc
aacatgaacttccggaaaccctccaaaattcaagagaaggccctacctctactcctcatg
aacccacccacgaacatgattgcgcagtcgcagtccggaacaggcaagactgctgccttc
tccctgaacatcctgtcccgcatcgacctcagcagaaacgagccacaggccatcgctttg
gctcccagccgagaactcgctcgccagatcctgggagtcatcacacacatgggacagttc
atggagggcttgaagactatggctgctattccagacccaaccaagaggaaccagaggctc
gacgcgcacgtcctcgttggtacacctggtactgtccaggagcagctcaagcgccggctt
atcaagtccgacagcatcaagatccttgtgctcgacgaggccgataacatgctggatcag
cagggcatgggcgaccaatgcactcgtgtcaagtcccttctgccaaagaacatccaaacc
gttctattctccgcgacattcccgccagccgttataaactatgccaacaagtttgcgccc
aactccaacgtgctgaccttggcgcacgaagagctcactattgagggcatcaaacagctg
tacatcgatatcgacaaggaccaagacaaatactcgactcttctcaagttctacggtctt
atgacacaggcatcgtcgatcattttcgttagaacccgaaggactgctgaggagctcgag
aggcgcatggtagcggaaggtcacaaggtcgctcaactaagtggtgctctagagggtcag
gaccgtgatcgcgttatcgatcagttccgaagtggtgaggcaaaggtgctgatcaccacc
aacgtgcttgctcgtggtatcgacgttgagtctgtgactatggtaattaactatgatgtt
cccaccatggccgacggcagggaagctgaccctgagacctaccttcaccgcattggtcgt
actggtcggttcggacgtgtcggtgtcgccttgacctttgttcacgacaaggctagctgg
cagcaactgcacgacatcgcatcatacttcaagaccgacctccaccccatcgacacgtcc
gactgggacaacgtcgaggagatgattcagaagatcatcaagagctcgcgagccggcaag
agcaccaaggagatgacggagatgattacctcgtag
DBGET
integrated database retrieval system
