Parastagonospora nodorum: SNOG_10712 Help Entry SNOG_10712        CDS       T01161                                  Name (RefSeq) hypothetical protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism pno  Parastagonospora nodorum Pathway pno03013   Nucleocytoplasmic transport pno03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:pno00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     SNOG_10712    03015 mRNA surveillance pathway     SNOG_10712  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pno03019]     SNOG_10712 Enzymes [BR:pno01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      SNOG_10712     5.6.2.5  RNA 5'-3' helicase      SNOG_10712 Messenger RNA biogenesis [BR:pno03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      SNOG_10712    mRNA cycle factors     Common to processing body (P body) and stress granule      SNOG_10712 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_19 AAA_30 ResIII UvrD-helicase Viral_helicase1 DEAD NPHP3_N SLFN-g3_helicase PIF1 NAT10_TcmA_helicase nSTAND3 AAA_22 AAA_5 Motif Other DBs NCBI-GeneID:  5977880 NCBI-ProteinID:  XP_001800973 UniProt:  A0A7U2I8B6 Q0UC02 LinkDB All DBs Position Unknown AA seq 1078 aa AA seqDB search MEGAFTHMGNHLVSDSAATINAGAGDDESILDHGLTGSRRRRIGEEDDETDIYDDDDMES MASMPVGGANGKPAMRAEEEVELPAHACAYCGIHNAGSVVKCLACTKWFCSARGNSSSSH IINHLVRARHKEVQLHPASSLGDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAS MPSQKDMNWDTSRWQPLIEDRSFLPWLVPAPTDQEQLRARHLSPQTIAKLEELWKDNANA TIADLEKGAGQEEVIAKVLLRYDDAFQYQNVFGPLVKIEADYDRKLKESQSQDNLVVRWD MALNNKHTASFILPKLELGDVKLAVGDEMRLRYTGELRPHWEGVGYVIKIPNNQSDEVTI ELRTKGDHKSVPTECTHNFSADYVWKATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEV ASAPMKIQIPRKFSVPGLPELNGSQINAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLC KISASQVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDT NVELNKLNQLKSDVGELSSQDEKKFKQLTRAAEREILNAADVICCTCVGAGDPRLSKMKF RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVI LGCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVADSPMMFWS NLGAEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQPGDIGIITPYEGQRSYVVSSMQAT GSFKKENYKDVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGL VILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLTNLQVSLLQFSRPKQTYRGPQRYQMAY QHANAMTSGRQGSWSGNKPTRQEYNDNGSIVGYIPDDVSSVHSSALGGVGVPSNYPPMFS NFQESWPLPGRPGSGAKGRNGAPASVAGESVAASELTDSRSDAPGGISLSGLSLNDYNKP TSLSQSDRLNRFVESTRQGPALGAGFGAGRGGLRNGLGGFDDDDARSVSTAFASQIGG NT seq 3237 nt NT seq  +upstreamnt  +downstreamnt atggagggcgcattcacgcacatgggcaaccacctggtatccgactctgcggcgaccatc aatgctggcgccggcgacgacgagagcatcctggaccatggcctgacgggctcacgccga cgccgcattggcgaggaagatgacgagacggatatttacgacgacgacgacatggagagc atggcgagcatgccagtgggcggcgccaacggcaagcctgcgatgcgggctgaggaagag gtcgaactccccgcacacgcgtgcgcatactgcggcatccacaacgccggcagcgtcgtc aagtgcctggcctgcaccaagtggttctgcagcgcccgcggaaactcgtcgtcttcgcac atcatcaaccatctcgtccgcgcccgccacaaggaagtccagctgcaccccgcctcgtcg ctcggcgacaccacgctggaatgctacaactgcggcaccaagaatgtcttcctcctcggc ttcatccccgccaagtctgacacggtcgtcgtgctgctgtgtcgccagccgtgcgcctcg atgccctcgcagaaggatatgaactgggacacgtcccgctggcagccgctgatcgaggac cgctccttcctgccctggctcgtgcctgccccgaccgaccaagaacagctccgcgcccgc cacctcagcccccagaccatcgcgaagctcgaagagctgtggaaggacaatgcaaatgcc acaatcgccgatcttgagaaaggtgctggtcaagaggaggtcattgcaaaggttctgctg cgctatgacgatgctttccagtaccagaacgtatttggtcctctggttaagatcgaggcc gactacgaccgcaagctgaaggagtcgcaatcgcaggacaacctggtcgtgcgttgggac atggccctgaacaacaagcacacggcaagcttcattcttcctaagctggagttgggcgac gtcaagcttgcggtgggcgacgagatgcgcctgcgctataccggagagcttcgcccccac tgggagggtgtcggctatgtcatcaaaattcccaacaatcagtccgacgaggtcacgata gaattgcgtaccaagggcgatcacaagtctgtgcccaccgaatgcacccacaacttcagc gccgactacgtctggaaggctacttctttcgaccgcatgcagcacgccatgaaaactttt gccatcgacgagatgagtgtttccggatacatcttccaccgcctgctcggtcacgaggtc gcgtctgcgcccatgaagatccagattccccgcaagtttagtgttcctggtcttcccgag ctcaacggcagtcagatcaatgctgtgaagagtgtcttgcaaaagccccttagcttgatc caaggacccccaggcacgggaaagacggtcacttctgccaccatcatctaccacttgtgc aaaattagcgccagccaggtcctcgtctgtgcaccatccaacgtcgcggtcgaccagttg tgcgaacgtattcatcttactgggttgaagacggttcgtgtcactgccaaatcgagggaa gatgtcgagtcgccagttggcttcctgtcgctccatgagcaagtccgcatgaacgatacc aacgtcgagctcaacaagctgaatcagctcaagagcgatgttggcgagctgtccagtcag gacgagaagaagttcaagcagcttacccgcgcagccgagcgcgagattctcaacgcagcc gatgtcatttgctgcacctgcgttggagcgggcgaccctcgactttccaagatgaagttc cgcacagttctgatcgacgagtctactcagtctgccgaacccgagtgcatgattcctctc gtccttggttgcaagcaggtcgtcctggttggtgaccaccagcagttgggacctgtcatc atgaacaagaaggctgctacagctggtcttaaccagtctcttttcgagcgcctggtcatt cttgggtgctcgccgattcgacttcaagtgcagtaccgcatgcatccctgtctgtccgaa ttcccatcgaacatgttctacgaggggtcccttcagaacggtgtcacgatgcaagagcgt atccgccgtgatgttgatttcccatggccagtcgccgacagcccgatgatgttctggtcg aacctcggcgctgaggagatctcagcctccggtacgtcatacctcaaccgtactgaagcg cagaatgtcgagaagattgtcactcgattcttcaaggcaggtgtgcagccaggcgatatt ggtatcatcacaccatacgaaggccagcgcagctacgtcgtcagctccatgcaggctact gggagcttcaagaaggagaactacaaagacgtcgaggtagcttcagtcgacgctttccaa ggtcgtgagaaggactttattatcctgtcttgcgtgcgttccaatgaccaccagggcatt ggtttcttgagcgaccctcgtcgtctcaacgtcgctctcacgcgtgccaaatacggtctc gttattctcggcaatccgaaagtactctcaaagcatccgctctggcactacctcctactc catttcaaggagcgcaattgtcttgtagagggacccttgaccaacttgcaggtttccctg ctccagttcagtcgtccaaagcagacctatcgtggacctcagcgttatcagatggcttac cagcacgcaaatgcgatgacttctggtcgccaaggcagctggagcgggaacaagcccaca cgtcaggagtacaatgacaacggttcgatagttggttacatcccagacgatgtatcctcg gtccattcgtccgcccttggcggcgttggtgttccgtccaactaccctcctatgttctcc aacttccaggagtcatggccgctacctggtcgccctggatctggcgccaagggccgaaat ggtgcacctgccagtgtggctggcgagtctgttgcggccagtgagctgaccgactctcgc agcgacgctccaggcggtatcagtctctcgggacttagtttgaatgactataacaagccc acatcgctaagccagtctgaccgcctcaaccgtttcgttgaatcaactcgccaaggcccg gctctgggtgctggattcggtgccggtcgtggcggtctacgcaatggcctaggtggcttc gacgatgacgatgcgcggagtgtttccacagcttttgctagtcagattggtggttga

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