KEGG   Parastagonospora nodorum: SNOG_10968
Entry
SNOG_10968        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
pno  Parastagonospora nodorum
Pathway
pno03082  ATP-dependent chromatin remodeling
pno03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SNOG_10968
   03083 Polycomb repressive complex
    SNOG_10968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pno03036]
    SNOG_10968
Chromosome and associated proteins [BR:pno03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     SNOG_10968
  Histone modification proteins
   HAT complexes
    HATB complex
     SNOG_10968
   HDAC complexes
    Sin3A-HDAC complex
     SNOG_10968
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     SNOG_10968
    PRC2.2
     SNOG_10968
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     SNOG_10968
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SNOG_10968
  Chromatin remodeling factors
   NuRD complex
    SNOG_10968
   NuRF complex
    SNOG_10968
   NuRF complex (fruit fly)
    SNOG_10968
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd NBCH_WD40 MIOS_WD40 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 5978132
NCBI-ProteinID: XP_001801224
UniProt: Q0UB96
LinkDB
Position
Unknown
AA seq 437 aa
MDETMSDAIDAREMDDQEQVEHKIINEEYKIWKKNSVFLYDMLYGRALEWPTLTTQWLPD
KKPYVCIVEGTNMSQHRVILGTHTSNQAQNYLQIAHCEIPDFRVPDLSELNEERGEIGGH
GNAKRPFEFKIVQKINHPGEVNKARYQPQNPDIIASLCVDGKVLIFDRTKHPLQPKGDAI
QFEAELVGHTTEGFGLSWSPLNEGHLVTGNEDTTVKTWDIRSGFSKTNKTVSPTATYEVH
SATVNDVQYHPIHNFLIGTASDDLTWQIIDTRMESHKKALYRKEAHEDAVNCIAFHPEFE
MTMASGSADKTVGLWDLRNFEKKLHSLSSHRGDVIGLQWHPQDAAILASSSYDRRICMWD
LSKIGDEQTEEEAEDGPPELLFMHGGFTNRICDFDWNKNDPWVMMGAAEDNQLQIFRPSR
KLVEPLNKTVNHGEVSD
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggacgagaccatgagtgatgcaatcgacgcccgcgagatggacgaccaggagcaggtc
gagcacaagatcatcaacgaggagtacaagatatggaagaaaaactccgtatttctctat
gacatgctctacggacgcgcgctggagtggccgaccctcactacgcaatggctgccagac
aagaagccgtatgtttgcatagtcgaaggcaccaacatgagccagcaccgcgtcattctc
ggaacgcatacgtcgaaccaagcgcaaaactacctccaaatcgctcactgcgaaataccc
gacttccgtgtcccagacctctctgaactgaacgaggagcgcggtgagattggcggacat
ggcaacgcaaagcgaccattcgaattcaagattgtgcagaaaatcaaccacccaggcgag
gtcaacaaggcgcgctaccagccacagaatcctgacataatagcatcactatgcgtagac
ggcaaggtgctgatcttcgaccggaccaagcacccgcttcagcccaaaggtgatgccatt
cagtttgaggctgagcttgtaggacacacaacagagggttttgggctgagctggagtcca
ctcaacgaaggccacctcgtaacgggtaatgaagacacaactgttaagacatgggacatc
agatctggattctccaagaccaacaagactgtcagtccgactgcaacatacgaggtccac
agcgcgacggtgaacgacgttcagtaccacccaatccacaactttctcatcggaaccgca
tccgacgatctcacatggcagatcatcgacacccgcatggagtcgcacaaaaaggcgctc
tacaggaaggaagcacacgaagatgctgtgaactgcatcgctttccaccccgagtttgag
atgaccatggcttcaggctccgcagacaagaccgtcggtctttgggacttgcgaaacttc
gagaagaagctgcacagcctgtcaagccatcgcggagatgtcatcggtctgcaatggcat
cctcaggatgcggctatccttgccagttccagctacgaccgccgtatctgcatgtgggat
ctcagcaagatcggcgacgagcagaccgaggaggaggctgaagatgggccaccagaactg
ctgtttatgcacggcggcttcacgaaccgcatctgcgacttcgactggaacaaaaacgac
ccgtgggtcatgatgggtgccgcggaagacaaccagctgcagattttccgtcccagtcgc
aagcttgtcgagccactgaacaagacagtcaaccacggcgaggtttcagattga

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