Parastagonospora nodorum: SNOG_10968
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Entry
SNOG_10968 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
pno
Parastagonospora nodorum
Pathway
pno03082
ATP-dependent chromatin remodeling
pno03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SNOG_10968
03083 Polycomb repressive complex
SNOG_10968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pno03036
]
SNOG_10968
Chromosome and associated proteins [BR:
pno03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
SNOG_10968
Histone modification proteins
HAT complexes
HATB complex
SNOG_10968
HDAC complexes
Sin3A-HDAC complex
SNOG_10968
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
SNOG_10968
PRC2.2
SNOG_10968
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
SNOG_10968
Heterochromatin formation proteins
Other heterochromatin formation proteins
SNOG_10968
Chromatin remodeling factors
NuRD complex
SNOG_10968
NuRF complex
SNOG_10968
NuRF complex (fruit fly)
SNOG_10968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
NBCH_WD40
MIOS_WD40
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
5978132
NCBI-ProteinID:
XP_001801224
UniProt:
Q0UB96
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MDETMSDAIDAREMDDQEQVEHKIINEEYKIWKKNSVFLYDMLYGRALEWPTLTTQWLPD
KKPYVCIVEGTNMSQHRVILGTHTSNQAQNYLQIAHCEIPDFRVPDLSELNEERGEIGGH
GNAKRPFEFKIVQKINHPGEVNKARYQPQNPDIIASLCVDGKVLIFDRTKHPLQPKGDAI
QFEAELVGHTTEGFGLSWSPLNEGHLVTGNEDTTVKTWDIRSGFSKTNKTVSPTATYEVH
SATVNDVQYHPIHNFLIGTASDDLTWQIIDTRMESHKKALYRKEAHEDAVNCIAFHPEFE
MTMASGSADKTVGLWDLRNFEKKLHSLSSHRGDVIGLQWHPQDAAILASSSYDRRICMWD
LSKIGDEQTEEEAEDGPPELLFMHGGFTNRICDFDWNKNDPWVMMGAAEDNQLQIFRPSR
KLVEPLNKTVNHGEVSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaccatgagtgatgcaatcgacgcccgcgagatggacgaccaggagcaggtc
gagcacaagatcatcaacgaggagtacaagatatggaagaaaaactccgtatttctctat
gacatgctctacggacgcgcgctggagtggccgaccctcactacgcaatggctgccagac
aagaagccgtatgtttgcatagtcgaaggcaccaacatgagccagcaccgcgtcattctc
ggaacgcatacgtcgaaccaagcgcaaaactacctccaaatcgctcactgcgaaataccc
gacttccgtgtcccagacctctctgaactgaacgaggagcgcggtgagattggcggacat
ggcaacgcaaagcgaccattcgaattcaagattgtgcagaaaatcaaccacccaggcgag
gtcaacaaggcgcgctaccagccacagaatcctgacataatagcatcactatgcgtagac
ggcaaggtgctgatcttcgaccggaccaagcacccgcttcagcccaaaggtgatgccatt
cagtttgaggctgagcttgtaggacacacaacagagggttttgggctgagctggagtcca
ctcaacgaaggccacctcgtaacgggtaatgaagacacaactgttaagacatgggacatc
agatctggattctccaagaccaacaagactgtcagtccgactgcaacatacgaggtccac
agcgcgacggtgaacgacgttcagtaccacccaatccacaactttctcatcggaaccgca
tccgacgatctcacatggcagatcatcgacacccgcatggagtcgcacaaaaaggcgctc
tacaggaaggaagcacacgaagatgctgtgaactgcatcgctttccaccccgagtttgag
atgaccatggcttcaggctccgcagacaagaccgtcggtctttgggacttgcgaaacttc
gagaagaagctgcacagcctgtcaagccatcgcggagatgtcatcggtctgcaatggcat
cctcaggatgcggctatccttgccagttccagctacgaccgccgtatctgcatgtgggat
ctcagcaagatcggcgacgagcagaccgaggaggaggctgaagatgggccaccagaactg
ctgtttatgcacggcggcttcacgaaccgcatctgcgacttcgactggaacaaaaacgac
ccgtgggtcatgatgggtgccgcggaagacaaccagctgcagattttccgtcccagtcgc
aagcttgtcgagccactgaacaagacagtcaaccacggcgaggtttcagattga
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integrated database retrieval system