Parastagonospora nodorum: SNOG_12102
Help
Entry
SNOG_12102 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
pno
Parastagonospora nodorum
Pathway
pno03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SNOG_12102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_12102
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SNOG_12102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
5979246
NCBI-ProteinID:
XP_001802336
UniProt:
Q0U812
A0A7U2FA10
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MNGTPARRGVGGFPSTPQTTNRSPDVRSPNGGTPRPNVRTSLPDLPKAPAQSGSGPLIPS
DILDPAQQRFYVFAIYIGLWAYRLYDFYTLIIEEDQSLILCLKWCFFDMLFMFGTPLLEI
PWLEWSNGAAFLLFVAHAAIDVMLMFKIGVPVQTWFIGLVGFLWDSELAISERSVKPGAI
LHNASLILGKQIINILPEGSAILNPDKQPFCLSSTITQLEIPILINQTEPIEMELLRIDV
ATNTNETITIKKKDLGKMLDKARKSLKKSSKNVDPDDPLLLRYTVKKPGVYLLKRVVDQS
KLQVRPRASSLVVATCPQARVKPTSGNRCRNDLSDVALEVEGTPPLSIKYRLAVNGVQRG
GSEFQNLQPDDAVSPLSRHSSQALVKSGHEDVTWAKSQKITVPLNETVTTSGLWEYEVEE
VHDGFGNMVNFAALDDDERPKHKATGLRQTFQVHERPTIFLKGCSPQTPIKVARNNVERL
PVAYSSTSRKAIEAPHTISYIFTPEQDIVTDGYHSADAKLKKEVMRSTKEQPLIQAPGLY
TLKSVSTDFCEGEVLEPTSCLLQNPPEPNLSLTSDDIVDKCAGNPIGLQVSLNLVGSPPF
TVYYSEYFNGRKKQTRPIQIASLRWTTDFVPKDAGHYKYIFESVSDAVYKDVPLKNIELQ
QNVRPSAHARFVESRRPQQACIDDTADFDVRLSGDAPWKLEYEIVHNGKRAKHTVDISDE
HYTIRTDKLSSGGEYVVTLTSVSDKVGCKEYLQEEARVNVRHERPKAYFGHIEGRQAVRA
LEGRTVGLPLRFTGNGPWRLEYENLATKEIKKETFQTANSFLDVKTDGTYQLLSVKDSVC
PGLIEEKASQFDVSWVARPALSIAETPAIIVEGGKYIRDAVCEGEDDSFDISLSGNAPFD
VSYREELKDKRGKNVKVQEKELHATSGITSIKADTAEAGTYEYTFVKLADAKYDHSRKHF
TPVAVRQIVHPRPSARFDKPGKTYSYCSREAEGEEVIPITLEGVPPFHLEVEIKHQGTPK
PELSVHKNIPDNKYDLKIERNKLNLGQSSIFIRKVRDSRGCTLKPQPNSKDRVQISVFDA
PTATPLEDRTDFCVGERLSYALSGQQPFTVYYTFEGKQRKASNPGTNFRRLAELPGTFTI
TGLRDSASECLATLNLEKHIHPIPSVKLSGGQVSEIDIHEGGGTDLEFEFWGTPPFEFTY
TRSTNAVRGRKSKVLEVKTERSEGHHLRIPVQEEGTYEVVSIKDRWCSFAREGLDVKKGG
QKMLTY
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcacaccggcgcgcagaggcgtgggcggcttcccctcgacaccgcaaacgacg
aatcgatcgccagacgtgcgaagcccgaatggcggcacgccgaggccaaatgtgcggacg
tcgcttccagacctgccaaaagcacccgcacagtcaggctcagggcctctgataccatcg
gacatcctcgatcccgcccagcagcgcttctacgtcttcgccatctatatcggcctatgg
gcttaccgactatacgacttttacaccctgatcattgaggaggaccaatcattaattctg
tgtctgaaatggtgtttcttcgacatgctgttcatgtttggcacgccgctgctggaaatt
ccctggttggagtggagcaacggcgctgcatttttgctgtttgtggcgcatgctgcgata
gatgtcatgctcatgttcaagattggcgtccctgtgcagacgtggtttatcggcctggtg
ggcttcttgtgggacagcgagctggccatcagcgagcgcagcgtcaagcccggcgcgatt
ctgcacaacgcctccttgatcctcggaaagcagatcatcaacatcctccctgagggatcc
gccatcctgaaccccgacaagcagcccttctgcctgagctcgaccatcacccagctcgaa
atacccatcctcatcaaccagaccgagcccatcgagatggagctcctgcgcatcgatgtc
gcgacgaacaccaacgagaccatcacgataaagaagaaggatttgggcaaaatgctggac
aaggcgagaaagtcattgaagaagtcgtcgaagaatgtcgacccggatgacccgttactg
ctgcgatacactgtcaagaagcctggtgtataccttctgaaaagagtcgtggaccagtcg
aagctccaggtccgccctcgcgcctccagcctagtcgttgcgacatgtccgcaggctcgc
gtaaagcctacgagcggcaaccgatgtcgcaacgatctctctgatgtggcacttgaggtt
gagggcacgccgcccctgagcatcaaataccgcctagcagtaaacggtgttcagcgaggt
ggatctgagttccagaatctacagccagacgatgccgtctcgccattgtcaagacactcg
tcgcaagctttggtgaagagcgggcatgaggatgtcacgtgggcaaagtcgcagaagatt
acagtgccactgaacgaaactgtcacgactagcgggctctgggagtacgaggttgaagaa
gtgcacgacggctttggcaacatggtcaatttcgccgctcttgacgatgacgagaggcca
aagcacaaggctaccgggctgcgccaaacgttccaggtccacgagcgccctactatcttc
ttgaagggctgtagtcctcagaccccaatcaaagttgccaggaacaatgtcgagcgcctc
cctgtcgcctacagctcaacatctcgaaaggcaatcgaggccccgcacacaatctcatac
atctttactccggagcaagacattgtcacagacggatatcacagtgcggatgctaagctc
aagaaggaagtcatgcggagcacgaaagagcaacccctcatccaagcccctggcctatac
acactgaaatcggtatcgaccgacttctgcgaaggcgaggtccttgagcccacctcttgt
ctgctccaaaacccgccagagccaaacttgagcttgacgagcgacgacattgtcgacaaa
tgtgcaggcaaccccatcgggctccaagtcagtctcaacctggtgggcagcccgccattc
actgtctactacagcgagtatttcaacggacgaaagaagcaaacacgaccgatccagatc
gcctcccttcgatggaccaccgatttcgttccaaaagatgctggtcactacaagtacatt
ttcgaaagcgttagtgacgctgtgtacaaggatgtgcccttgaagaacatcgaactgcag
cagaacgtcaggccttcagcacatgcccgtttcgttgaaagcagacggccccagcaggct
tgtattgacgacaccgccgactttgacgtacgcctttctggagacgcgccatggaagctc
gagtacgagatcgtccacaacggcaagcgcgccaagcacacagttgatatcagcgacgag
cactacaccatccggacagacaaactttcgagcggtggcgagtatgtcgtcacccttacg
agtgtcagtgacaaggtgggatgcaaggagtacctgcaagaggaagccagagtcaacgta
cgacacgaacgacccaaagcctactttggtcacatcgaaggccgccaagctgtcagggct
ttggaaggcaggaccgtcggactgccgctgcgtttcaccggtaatggtccctggagactg
gagtatgaaaatctggcgacgaaagagatcaagaaggagactttccaaacggccaactca
ttcttggacgtcaagaccgatggcacataccagctcctgtctgtcaaggactctgtctgc
ccaggtcttattgaggagaaggctagtcagttcgacgtgtcttgggttgcacgaccagcg
ctcagcattgccgagactcctgctatcattgtagagggcggcaaatacatccgggatgcg
gtttgtgagggtgaagatgactctttcgacatttcgctgagtggaaatgctccattcgat
gtttcgtaccgcgaagagctcaaggacaagaggggtaagaacgtcaaggtacaagaaaaa
gagcttcatgctactagtggcatcacgtccatcaaggccgacactgctgaagcaggcaca
tacgaatacacgtttgtgaagcttgcagacgccaagtacgaccactcaaggaagcacttt
acgcctgtcgcagtgcgacagattgtccacccacgtccgagcgctcgctttgacaagcct
ggaaagacgtatagctactgctccagagaggctgagggtgaagaggtcatcccaatcact
ctcgaaggtgtgccaccgttccatcttgaggtcgaaatcaagcaccaaggcacaccaaag
ccggaactcagcgtccacaagaacattccagacaacaagtatgatctcaagatcgaacgc
aacaagctcaaccttggccaatcgtccatcttcatccgcaaagtacgcgattcgcgtggc
tgcacgcttaagccgcagcccaacagcaaagatcgcgtccagatcagcgtgttcgacgct
cctaccgctactccccttgaagatcgcaccgacttctgcgttggcgagcgtctgtcttac
gctcttagcggccaacaaccatttaccgtctattacaccttcgaaggcaaacaacgcaaa
gcctccaaccctggcacaaacttccgccgtcttgccgaactccccggaaccttcactatt
accggtctccgcgactcagcctctgagtgcctcgccactctcaaccttgagaagcacatc
caccctatcccctcggtcaaactctctggcggccaggtcagcgagattgacatccacgag
ggtggaggcaccgacctggaatttgagttctggggcacgccgccattcgaattcacatac
acacgcagtacgaatgcggtacgtggcaggaagagtaaagtcttggaggtcaagacggag
aggagtgagggtcatcatttgagaatccccgtgcaagaagagggcacgtatgaggttgta
agcatcaaggacaggtggtgtagttttgcgagagagggtttggatgtcaagaagggtggg
cagaagatgttgacgtattga
DBGET
integrated database retrieval system
