Parastagonospora nodorum: SNOG_12155
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Entry
SNOG_12155 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
pno
Parastagonospora nodorum
Pathway
pno03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SNOG_12155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_12155
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
SNOG_12155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
TPR_14
TPR_16
TPR_19
Motif
Other DBs
NCBI-GeneID:
5979296
NCBI-ProteinID:
XP_001802386
UniProt:
Q0U7V9
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MSDDAELAFLNAQQNEYDPATAYDPATSYEAAGDEEEYDPANNYSPHPQSDKSASMPQSA
ANSPPVAADGEGEDGLKPPPATASAEVSAAPTPSKQPRTRGGFVDESEDEEEEPVAQPKT
AAGPAESPQRSFTNTPNNTVPTPDVQLHSAQDQGASSLLSASVAVNESVPSIASTVPNGT
TPVPDVAMTGASDHMNVASARQSAASVTPMPTSTALPKARLPQDRIGILEDRIAEDPRGD
VEAWLSLIEEHRRRHKHDDARAAFERFLKVFPTAGEQWVEWIAFETELDELQKVEVLFGK
SIAQTGSYVPLYSSYIDFVRRRFNLTTDQTGQNRQTVTQAYEFVLGRVGIDVNAGKLWLD
YIEMLKTGPGDAGGSSWQDKQKMDTLRKVYQRAISIPHNATLEIWRDYDKFEMSVNKQTG
RKHLQEKSPSYMTARSAINVLDNNITRGVNRTTLPRLPPAPGFDGHDEYSNQVKLWKNWI
QWEKSDPLEILIDDKTAYQNRVLHLYNNALMALRFWPELWYEAAEWCFDNGLSAEGDKFL
TDGIEANPESSLLAFKKASQVELRTDFEDGQPGIIAKGKALLDTIYDLTAQTKKREEQLI
ARAKEMFEAQKHADEAARNNANGDDDEDEDELAKRLREKEEMHKMQIQGIVAGHNNEILT
LKKILTYAWIALMRAMRRVQGKGSPGAEVGGFRAVFAEARKKGKLLSEAYVASALIEHHC
YQDPAANKIFERGMKLFPEDEHFALEYIKHLIKLNDSTNARAVFETVVGKITSKPDQIAR
AKELFLFFHDYEAKFGELAQITKLEQRMLTLYPEDPQLQRFSQRFAGPTFDPTTVRPIIS
PRSQMKPIMHMQPVMNSVEEHQPTMPQQVEQRHASPPNFNFASPHLANIQPVAIHSPKRP
LDDADDNNQPRKLARGESPALKGAAGRRLDAARRNLATSGNTPVVQGPVPLPREINFLLS
IIPPAHTYRETRFNPEAMVAMIRDNARIALPNSVVPAPQRWGTTPTTAQQLASIQEKYGH
QHTGSTGSAWGQ
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgcagagcttgcgttcctcaatgcgcagcagaacgagtacgaccctgcc
accgcctacgaccctgctacctcctacgaagccgcgggcgacgaggaggagtatgatccc
gccaacaattactctccacacccgcagtctgacaagtcagcgtcgatgcctcaatcggca
gccaactcaccacccgtggccgccgacggtgagggcgaggatggtctgaagcctccgccg
gcgacagcttccgccgaggtctcagcggcgccgacgccgtccaagcagccgcgcacaagg
ggtggttttgtcgacgagagcgaggacgaggaagaggagcctgtcgcgcagcccaagact
gccgccgggcctgcagaatcaccacagcgttcatttacaaacacaccaaacaatacagtt
cccacaccagatgtacagttacatagtgcacaagatcagggtgcttcgtcccttctctct
gcttctgtcgctgtcaatgagtctgttccttctattgcttctactgttcccaacggcacc
acgcctgtcccagacgttgccatgacaggtgcttcagatcacatgaacgtagctagcgcc
cgacagtctgcagcttcagtcactcctatgcccacctctacagcgctgccaaaggcgcgt
cttcctcaggaccgcatcggtatccttgaagatcgcattgctgaagacccgcgtggtgac
gtcgaagcgtggctgagtctaatcgaggagcatcgcaggcgacacaagcacgacgacgcg
agagcggcctttgagcgcttcctcaaggtcttccccacagcaggtgagcaatgggtcgaa
tggatcgccttcgagacagaactagatgagctgcagaaggtagaggtcttgttcggcaag
tccatcgcgcagacaggttcttatgttccgttgtattcgtcgtacatcgactttgtccgc
cgccgcttcaacttgacgacggaccagactggtcagaaccgtcagactgtcacccaggcc
tacgagttcgttcttggacgggtgggtatcgatgtcaacgctggcaagctgtggctggac
tatatcgagatgctgaagacaggtcccggcgatgcgggcggcagcagctggcaagacaag
cagaagatggatactctgcgcaaggtctatcagcgtgcaatttccattccacacaacgcg
actcttgagatctggcgcgactatgacaagttcgagatgtctgtgaacaagcaaacagga
cgcaagcatctccaggagaaatctccttcatacatgaccgcacgaagcgccatcaacgtc
ctcgacaataacatcacgaggggtgtcaaccgaaccactcttccccgcctgccgccagcg
ccaggcttcgatggccacgacgagtactcgaaccaggtcaagctatggaagaactggata
caatgggagaagagcgacccgctcgagatcttgatcgacgacaagacagcgtaccagaac
cgtgtgcttcatctctacaacaatgccctcatggcgcttcgcttctggccagagctatgg
tatgaggcagcagagtggtgcttcgacaacggtctgtctgcggaaggggacaaattcctc
accgacggtatcgaagccaacccggagagctccctgctagcattcaagaaggccagccag
gttgagttgcgtacagatttcgaggatggccagccgggcatcatcgccaagggcaaggcc
cttttggacaccatctacgacctgacggcgcagacgaagaagcgcgaggagcagttgatt
gctcgcgctaaggaaatgttcgaagctcagaagcatgctgatgaggccgctcgcaacaat
gcgaacggagacgatgacgaagatgaagacgagctcgcgaaacgcctccgggaaaaggag
gaaatgcataagatgcaaatacaaggaattgttgcaggccacaacaatgagattctgacc
ctcaagaagatactcacctatgcttggattgccctgatgcgagccatgcgacgcgtgcaa
ggcaaaggctcgccaggcgcagaggttggtggtttccgcgctgttttcgctgaagctcgt
aagaagggcaagctccttagtgaagcgtatgtcgccagcgccctgatcgagcatcactgt
taccaagacccagctgccaacaagatctttgagcgtggcatgaagctcttccctgaagat
gagcactttgcgttagaatacatcaagcacttgatcaagctgaatgattcaaccaatgca
cgcgccgtctttgagactgttgtcggaaagatcacatccaagccggatcagattgctcga
gccaaggagctgtttctcttcttccacgactatgaagccaagttcggcgaattggctcag
atcaccaagctggagcaacgcatgctcaccctgtaccctgaggatccgcaactacagcgc
ttctcccagcgtttcgcgggtcctaccttcgatcccaccactgtccgcccgatcatctcc
ccgcgctctcagatgaagcctatcatgcacatgcagcccgtcatgaactcagtggaggag
caccaacccaccatgccccaacaagtggagcagcgccatgcctctcctcccaacttcaac
ttcgcttcaccgcacctcgcaaacatccagcccgtcgccatccactcccccaagcgcccc
ctcgacgacgccgacgacaacaaccagccccgcaagctcgcgcgcggcgaatcccccgcc
ctcaaaggcgcagccggccgccgtctcgatgccgcgcgccgcaacctggccacctcgggc
aacacgccagtcgtccaaggccctgttcccctcccccgcgaaatcaacttcctcctcagc
atcatcccgcccgcacacacgtaccgcgagacgcgcttcaaccccgaagccatggtcgct
atgattcgcgataacgcgcgcattgcgctgccgaattcggtggtgcccgcgccgcagcgt
tggggcacgacgcccactaccgcgcagcagttggcgagtattcaggagaagtacggacat
cagcatactgggagtacggggagtgcttggggacagtaa
DBGET
integrated database retrieval system