Parastagonospora nodorum: SNOG_12221
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Entry
SNOG_12221 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K11771
SWI/SNF chromatin-remodeling complex subunit SWI1
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pno03021
]
SNOG_12221
03036 Chromosome and associated proteins [BR:
pno03036
]
SNOG_12221
Transcription machinery [BR:
pno03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
SNOG_12221
Chromosome and associated proteins [BR:
pno03036
]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
SNOG_12221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
AAA_23
Motif
Other DBs
NCBI-GeneID:
5979357
NCBI-ProteinID:
XP_001802447
UniProt:
Q0U7P3
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MDFQSPQNGMYDPSSFIDPSAIANPQMNGARSYPMSSIPQKRDSTGAALSLSRSQTPSQQ
PQFGFPQQQNFTNTPSPTMQSQNFPAQLGAQRMQTASPAQNPHAPQMSPMGFQNSPMNPA
FNSNANSQFPVQSVQLSQNLQSRQQEAQRQYAMRLQAQAQQQQMGNLAASNMAAQQRHQG
GQMPGGMPGGMPGGMPGGMPGGMPAGMQQPAMQPGMQPGMMQAQQQQQQQQQQQQQQQQQ
QQQQQQQHQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQNPQYQYQQFLKNVGALMAQQRR
PFNSQPTVAGRPINLQQLYTIVIRYKGHRLVTQSQGWPKIAQLMNIHPQQFPSASQELQQ
IYEQNLALYESAFFQRQNALKTGGQPGQQMGGMGSQMSPTRPPMPGGQNNVSAQQEYLQQ
LQRSQEAMKQQQQQQQQQQRQSATPMQQTPQPQQFDPPSQPQQSTPLQSNASLPSMNGHS
TPQPEGSARKSLTRQLEGTPTQGREPSQALASPSKPGEPAVQPETALVKVEDVDKPKPVI
ERDDGIRVYQPQYRLQDKWGGLDFESRNFVNMIEAIVTYKPNAPLLSELGAIDIRALTMS
LRSGLHAETRLALDTLTRITYDNTIQFDLAQCEDLTDVLVDFAEEQLEILGNDNPEVTDI
LDLTPYEDVLHHCRAEAATLQDLPEAGSKAHILDRTADRLLAITTIFRNLSFLEVNHASL
VSFPVLKFISNFIRLVGTRVLLLRSHINTFDFMKDVITFFSNTGAKIVLPSREDAYAVLH
FLCAFAPCPRPSEPVKFTPFNPQIHRYLPSAVDSLAKLLARDDPNRTYYKQIFINEATST
PSYDLLTRAFGLAISVAPDRNYIENRMYQMQGQPVKEVRMFEARIAESRKAYLMQGMLAA
DILASLAPGAESGLCRSWLESEDGWAGSLLKFAMSLSATDAAMPHQPPPPQNIRGQRPME
HDREGFHLIVHRALSTLQKLGDKSKGGEALVKGVQTNGHASDMMDEDDDDDDMDVFSFNG
TSWKVKADILPRKETLRRRPFDGTARCAELESILQDWISR
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggacttccagtcgccccaaaacggcatgtacgacccctcgagcttcatcgacccgagc
gcaatcgcgaacccacagatgaacggcgcgcgatcatatcccatgtcatcaataccccag
aaacgggattcgaccggcgccgcgctctccctctcgcgctcacagaccccgtcgcaacaa
ccccaatttggcttcccgcaacaacagaacttcaccaatactccgtcgccgaccatgcag
agccagaacttccccgcgcaattgggcgcccagcgaatgcagaccgcgtcgccagcccaa
aacccacatgcgccgcagatgtccccaatgggtttccagaactctccgatgaatcccgcg
tttaactcgaatgccaattcccagtttcctgtccaatcagtacagctgtcccaaaatctc
cagagccgacagcaggaagcccaaagacagtacgcaatgcgcctacaagctcaagcgcag
cagcagcaaatggggaacctagccgcaagcaacatggcagcgcagcaaagacatcaaggt
ggacagatgcccggcggaatgcccggtgggatgcctggcggaatgcccggtgggatgcct
ggcgggatgcctgctgggatgcaacaaccagcgatgcagccgggtatgcagcccgggatg
atgcaggcgcagcaacagcagcagcagcagcagcaacaacagcaacagcaacagcagcag
caacagcaacaacaacaacagcatcaacagcagcatcaacagcagcagcagcaacaacaa
caacaacaacagcagcagcagcagcagcagcaacaacaacaacagcaacagcagaatccc
caataccaataccaacagttcctcaagaatgttggcgcgctcatggctcaacaacgcagg
ccattcaactctcaacccacagttgccggacgacccataaatctgcagcaactctacacc
atagtcatacgctacaagggccatagacttgtcacacaatcacaaggatggccaaagatt
gctcaattgatgaacatccacccccagcagtttccaagtgcgtcccaagaactccaacag
atctacgaacagaatctggctttatatgaaagtgcctttttccaaagacagaacgctctt
aagacgggtggacaaccgggacaacagatgggcggtatgggctcacaaatgtcgccaacg
aggcctcctatgcctggcggccagaacaatgtttctgctcagcaagagtatctgcagcaa
ttacagagatctcaagaagctatgaaacagcaacagcagcagcagcagcagcagcagcgg
cagtccgcgactcccatgcagcaaacgccgcaaccccaacaattcgatcccccctcacaa
ccgcaacagtcgacccctctccagagcaacgcgtctcttccgagcatgaacggccatagc
acaccacaaccagaaggcagcgcacggaaaagcttgacccgacaattggagggcacacca
acgcaaggacgagagcccagccaggcgctagcatcgccatcgaagcctggggaaccggca
gttcaaccggagacagccttggtcaaggttgaagacgtcgacaagccaaaaccagtaatc
gaaagggacgatgggattcgcgtttaccagccacaatatcgactgcaggacaaatggggt
gggctcgacttcgagtcacgcaactttgtgaacatgattgaagctatcgtaacttataaa
ccaaacgcaccattgttgtccgagcttggtgcgattgatatacgggcgctcacgatgagt
ctccggtcagggctccacgcagaaacccgacttgcgctagacacgctcacgcggataaca
tacgacaacacaatacagttcgatctggcccaatgcgaagacctcacggacgtgctggtg
gactttgcagaggagcagctagagattctgggcaacgacaatcctgaagttaccgatatt
ttggacctgactccatacgaggatgtattgcaccactgccgcgcggaggctgccacactg
caagaccttccagaagctggttcgaaagcccacattctggaccgaactgctgatcggtta
ttggcaataaccactatctttcgaaacctatcattcctggaggtgaatcacgcctctttg
gtcagcttcccggtactcaaattcatttccaacttcattcggctcgtcggcacccgcgta
ctcctactgcggtcacacatcaacaccttcgactttatgaaagatgtcatcaccttcttt
tccaacaccggtgctaagatcgtgttaccttcacgcgaggacgcttatgccgtactccac
ttcctctgtgcctttgccccttgtcctcgtccgagcgagccagtcaagttcacacccttt
aatcctcagatacatcgctacctcccttccgctgtcgacagcctggctaagctcctggcg
cgcgatgacccaaatcgaacatattacaagcagattttcatcaatgaagcgacttccacg
ccttcttacgatcttctgacccgcgcgttcggcctagccatctccgtcgcgccagatcga
aattacatcgagaacaggatgtaccagatgcagggacagcccgtcaaggaagtgcgcatg
ttcgaagcgcgcatcgcagagtcacggaaagcctacttgatgcaaggcatgctcgcggca
gacatacttgccagcctggctcctggagcagaaagcggactgtgtcgctcatggcttgaa
tcagaagatggttgggcaggcagtctgctcaaattcgccatgtctctctccgccactgat
gctgccatgccccaccagcctcctccgccacagaacatccgtggtcagcggcccatggaa
cacgatcgcgaaggcttccacctcattgttcatcgcgctctctccacacttcagaaactg
ggagacaaatcaaaaggcggcgaggcgctggtcaagggtgtacaaacaaacggtcatgcg
tccgacatgatggacgaggatgatgatgacgacgacatggacgttttcagcttcaacggc
acatcgtggaaagtcaaagccgacattctcccgcgcaaggagacgttgcgtaggcgccct
tttgacggcacagctagatgtgcggagcttgaatcaattttgcaagattggatatctcga
tga
DBGET
integrated database retrieval system
