Parastagonospora nodorum: SNOG_12623
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Entry
SNOG_12623 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K17302
coatomer subunit beta'
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pno04131
]
SNOG_12623
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pno04147
]
SNOG_12623
Membrane trafficking [BR:
pno04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
SNOG_12623
Exosome [BR:
pno04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
SNOG_12623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_COPA_B
B-prop_COPA_B_2nd
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_Nup120_160
Beta-prop_SPT8
Clathrin
Beta-prop_IFT122_1st
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
5979755
NCBI-ProteinID:
XP_001802844
UniProt:
Q0U6J1
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MGIAINPKDPNTFASACLDRTVKIWSLGSSTPNYTLEAHETKGVNFIDYYPQSDKPYLLT
TSDDRTVKVWDYTTKALIATLEGHTSNVSFAVYHPELPVIISGSEDGTIKIWHSSTYRLE
QSLNYGLERAWCVANQKGKNGIALGFDDGAVVITMGREEPAVSMDAGGKVLWARHNEILT
SVIKGSDQLKDAERLTLPSKDLGSTEIYPQSLLHSPNGRFVAVCGDGEYIIYTALALRNQ
AFGSALDFCWASKEHDKDYAIRESSTSVKIFRNFKERSVLNVGFSADGLSGGVLLGVKGQ
GGIDSVRTGCWVGDCFIYTNSTNRLNYLVGDQTYTISHFDSPHYVLGYLPRDSRIYIADK
DVNVVSFALSLAVVEYQTLILRGDLESADELLPTVPKDQNNKIARFLEGQGYKEKALEVA
TDPEHRFDLALSLGELQTAVSIAREQDTEHKWKTVGDTALAAWDIKLAQECFVKAKDLGS
LLLLYSATSDQAGLRELASLAENAASNNVAFSALWQVGDIPACTDLLVKTNRFAEAVLFA
QTYKPSTAPALVKQWKESLEKENKAKVARLLGSPPADGEGDDEMFPEWEEYLRLEREGGT
VEDLLIQEDEGEAEDAAEEVVEEDGEEEEEDDEDEDDDDDEDDDEE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgccataaaccccaaggaccccaacacattcgcctcagcctgtctcgacagg
actgtcaagatctggtcgctgggcagctcgacgcccaactacactctcgaggcgcatgag
acgaagggagtcaacttcattgactactacccacaatccgacaagccgtacctcctcaca
acttccgacgaccgaaccgtcaaggtctgggactacaccaccaaggccctgatcgcaact
ctcgagggccacacatcaaacgtcagcttcgccgtataccaccccgagctgcccgtcata
atttcagggtccgaggatggcacaatcaagatctggcactcgtcaacataccggttagag
cagtcgctcaactacggcttggagcgtgcgtggtgtgtcgccaaccagaagggcaagaat
ggcattgcgcttggtttcgatgatggcgcagttgtcattaccatgggtcgcgaagagccg
gcagtcagcatggacgctggtggcaaggtgctctgggcaagacataacgagatcctcacc
tcggtcatcaagggaagcgatcagctaaaggatgctgaacggctcacactcccctccaag
gaccttggctcgaccgagatctacccgcaatctctcctccactctccaaacggacgattc
gtcgctgtatgcggtgatggcgaatacatcatctacacagcgctagcgctccgtaaccag
gctttcggctcggctttggacttctgttgggcatcgaaagagcacgataaggactacgcg
atccgggaatcatcaaccagcgtcaagatcttccgcaacttcaaggagaggagtgttctc
aatgttggcttctctgccgatggtctgagcggtggtgtgcttcttggtgtgaagggccag
ggtggcattgacagtgtacggaccggttgctgggttggtgactgcttcatctacaccaac
agcactaaccgcctgaactaccttgttggtgaccaaacctacacaatttcccacttcgac
tcaccccactacgtcctcggctacctgcctcgcgactctcgcatctacatcgccgacaag
gacgtgaatgttgtttcctttgctctctccttggcagttgtcgaataccaaacgctcatt
ctacgtggcgatctggaatccgcagacgaactattgccaacagtaccgaaggaccagaac
aacaagattgctcgcttccttgagggccaaggatacaaggagaaggcgctcgaagttgca
acagaccccgagcatcgcttcgaccttgcactgtctctcggcgaattgcaaacagcggtc
agcatcgcccgcgagcaagatactgagcataagtggaagacggtcggcgacactgctctc
gcagcatgggacatcaagctcgcgcaagagtgcttcgttaaagcaaaggaccttggatct
ctcctccttctctacagcgccacgtctgaccaggccggtctgcgcgaactcgcctcgcta
gccgagaacgccgcaagcaacaacgtagcgttctccgccctctggcaggttggcgatatc
cccgcctgcaccgacctcctcgtcaagaccaaccgctttgccgaagccgtcctctttgcg
caaacgtacaagcccagcactgcccctgcgctcgtcaagcagtggaaagagagtctcgag
aaggagaacaaggccaaggttgcgaggttgttgggctcgccgccggctgatggcgagggt
gacgatgagatgttccccgagtgggaggagtatctgaggctggagagggagggtgggact
gttgaggatttgctgattcaggaggatgagggcgaggcggaggatgcggcggaagaggtt
gttgaggaggacggggaggaagaagaggaggacgatgaggatgaggatgatgatgacgac
gaggacgacgatgaggagtag
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