Parastagonospora nodorum: SNOG_12767
Help
Entry
SNOG_12767 CDS
T01161
Symbol
SNOG_12766
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pno
Parastagonospora nodorum
Pathway
pno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOG_12767 (SNOG_12766)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_12767 (SNOG_12766)
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SNOG_12767 (SNOG_12766)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SNOG_12767 (SNOG_12766)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
5979896
NCBI-ProteinID:
XP_001802985
UniProt:
Q0U647
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MFQNQQNANRGAPLGTNRLQNGKMGGASQWAFGGAMGGAPGLSNTQARTNGGAMSSFAQA
MSGSQPHTPLNLEEFPSLSGAPQAQQNTSAQQMWANPTVRTAAQQQTIGRPQGQGPQQGQ
NGQTSSQQAQSQGQDDSSQSQFSGPGDDYRFGGQGGVGQLSGSAQPQTTNIDDFPPLGGA
AGEIGPDRRAGLIQNAAAFGNSGNSGAFPGLGQTRNGLSSPTDSQQDRVLNPTVGGRGLP
GGASRAPFENLRSTPTNLQDGNQRTPQQPGNMGFLGPQIGRTDLGALGQRPQQGQFDQNF
GAENSSSSPNTQIPLYKKLAEMSDTERYGLPGLLSLIPLESPDHSSLAMGQDLTVLGLDL
ARPENSPLHPTFGSPFVESNAKPVIPPDFTLPAAYTVTNVPPLHSKMGSFSAETLLAIFY
QFPKDILQELAAQELYNRDWRWHTKLQQWMMKDPDLPPPIRTTPTQERGWYLFFDVTNWR
RERISGMVALPWEDNCSALRELRAFLIFTEGAGSQIRHSLTLLGAACREMTPAGAKPIPL
HPSRFNLLARPVAASKACHVCALPGHSSPNIKSTAACRVALVSLVGFWEEVATHISALYG
TSARFKAAIVANKPTYEMRLDDGGLKGGDIESVLVERLTRGWLRFVSHVQRIRARVNVVL
SEGEVGRYVELERNLNGFLMDGSTLSDLFERSVAGKE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgttccagaaccaacagaatgcgaatcgcggcgccccgctgggcacaaatcggctacag
aacggcaagatgggcggcgcatctcaatgggcattcgggggagccatgggaggtgccccg
gggctgtcaaatacgcaagcacgaacgaacggcggcgcaatgtcaagcttcgcgcaagct
atgagcgggtcgcagcctcacaccccgctcaacctcgaggaattcccgtcgttatcgggc
gcaccgcaggcgcaacagaatacttcggcgcagcagatgtgggcgaacccaaccgtccgg
actgcggcgcagcaacaaaccatcgggcgaccacagggccaaggaccgcaacagggacaa
aatggtcaaacatcgagtcaacaagcgcaaagtcaaggacaggatgattcaagtcagagc
caattctctggtcccggcgacgactataggttcggaggccaaggaggcgtcggccagctt
tctggcagtgcgcagccccagacgaccaacattgacgactttccacctctaggcggcgca
gcaggagaaattggacccgatcgcagagcgggtctgatacagaatgctgcagctttcggt
aacagtggcaactcgggcgcattccccgggctcggtcagactcgtaatggcctgtccagt
ccgactgacagccagcaagatcgggtcctgaatcctacggttggcggaagaggactgccg
ggtggagcgtcacgcgcgcccttcgagaacctgcgctcaacaccaacgaacttgcaagat
ggcaaccaacgaacgcctcaacaacccgggaacatgggtttccttgggcctcagattggc
cgtacagatcttggtgcattaggtcaacggccgcaacaaggtcaattcgatcaaaacttc
ggtgccgagaactcaagctcctcgccaaacacgcagataccactgtacaagaagcttgcg
gaaatgtccgacacggagcggtacgggctgcctggactactctccctgataccacttgag
agccccgatcactcttcacttgccatgggccaagatttgacggtgctgggtctggatttg
gctcgaccagagaattctccactccatcccaccttcggatcgcctttcgtagaatcgaac
gccaagcccgttattcctccggatttcactctgcctgcagcatatactgtgacgaatgtg
ccgccgcttcactccaagatgggtagcttctctgcagaaactcttctagccatcttctac
caattccccaaggatattctgcaggagcttgcggcgcaagagctgtataaccgtgattgg
cgatggcacacgaagctacaacagtggatgatgaaggacccagatctgccaccaccaatt
cgcacaacaccaacgcaggagaggggttggtatctcttcttcgatgtgacgaactggcgg
cgggagaggatcagcggcatggtagccctgccatgggaggataattgctctgctttgcgt
gagctgcgtgctttcctcatcttcactgaaggtgcgggtagtcaaatccgccactccctc
accctcctcggcgccgcctgtcgcgaaatgacacctgccggcgcaaagcccattcccctc
catccctcgcgcttcaacctcctcgcgcgccccgtcgccgccagcaaagcgtgccacgtc
tgcgcgcttccaggccacagttcgccgaacatcaagagcacggccgcatgtcgggttgcg
ctcgtatcgctggtaggtttttgggaagaggtggcgacgcacatatccgcgctgtacggc
acgtctgcgcgcttcaaggctgcgattgtagccaacaagccgacttatgagatgaggctg
gatgatggaggcttaaagggaggggatattgagagcgtgttggtggagcggttgacgagg
ggatggttgcggttcgtcagccatgtgcaacgcatcagggcgagggtcaatgttgtgctg
agcgagggcgaggtcgggaggtatgtggaactggagaggaacttgaatgggttcttgatg
gatgggtcgacgttgtcggatctgtttgagaggagcgttgctgggaaggagtga
DBGET
integrated database retrieval system
