Parastagonospora nodorum: SNOG_12999
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Entry
SNOG_12999 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pno
Parastagonospora nodorum
Pathway
pno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SNOG_12999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pno03041
]
SNOG_12999
Spliceosome [BR:
pno03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
SNOG_12999
Complex C
U4/U6.U5 tri-SnRNP related factors
SNOG_12999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
5980125
NCBI-ProteinID:
XP_001803213
UniProt:
A0A7U2I849
Q0U5G5
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MANSKPRFDRADERALLDDRGYSGALIRGQNPALLFEKGVRERITESYYWKEQCFGLNAA
TLCDRAADLKFIGGTTGITGKPTPFLCLAFKMLQLVPEKAIVLEYLNFGGDEEEEDEEGG
VKKEEEEDGDEKPQDPNAAGKLGQFKYLRCLAAFYIRLAWEPVEIYKTLEPLLTDYRKIK
RRLKDAFTLTYVDQFIDDLLTKDRMCATSLWKLPSRANLEDLDMLEPRESPLGDEVDELD
EDMKREGSEGSVRSRTRSYDSRSRSRSYDSRSRSRTRTRSRSYEDGERRRTRSPSDRGRR
DSTSRSRTRSRSRRGEHSGDER
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattctaaaccccgtttcgaccgcgccgatgagcgcgccctcctcgacgaccgc
ggctactcgggtgccctaatccgcggccaaaatcccgcgctgctcttcgaaaaaggcgtg
cgcgaacgcattaccgagtcctactactggaaagagcaatgtttcggcctcaacgctgcg
accctgtgcgaccgcgccgccgacctcaagttcatcggcggcacaacaggcatcacgggg
aaaccgacgccctttttgtgccttgcgtttaagatgctccagctggtacctgagaaggcg
attgtgctggagtatttgaattttgggggggatgaggaggaggaagacgaggaggggggt
gtgaagaaggaggaggaggaagatggggatgagaaaccccaagaccccaacgccgccggc
aaacttggacaattcaaatacctgcgctgcctcgcagctttctacatccgcctcgcatgg
gagcctgtcgagatttacaagacgctcgagccgctgctcactgattaccgcaagatcaag
cgccggctcaaagacgcgtttactctcacgtacgtcgaccagttcatcgatgacctactc
acgaaggaccgcatgtgtgcaacgagtctgtggaaattgccgagcagggcgaatctggag
gatttggatatgttggagcccagggagagtccattgggggatgaggtggatgagttggat
gaggacatgaagagggaggggagtgaagggagtgtgaggagcaggacgaggagctatgat
agtaggagtcggagtaggagctatgatagcaggagtaggagtcggactcgaactcgcagt
cgtagctatgaagacggagagaggaggaggacgcgcagcccaagtgatcggggccgtcgg
gattcgacgagtagaagtcggaccaggagtcgcagtcgaagaggggagcacagtggcgac
gagagataa
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