KEGG   Parastagonospora nodorum: SNOG_13712
Entry
SNOG_13712        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K15542  polyadenylation factor subunit 2
Organism
pno  Parastagonospora nodorum
Pathway
pno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SNOG_13712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pno03019]
    SNOG_13712
Messenger RNA biogenesis [BR:pno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SNOG_13712
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st ASA1 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N MIOS_WD40 PEP5_VPS11_N Beta-prop_WDR41 NBCH_WD40 eIF2A Beta-prop_NUP159_NUP214 WDR54 CFAP251_N Beta-prop_HPS5 Beta-prop_VPS8 PAC11 Beta-prop_ACSF4 Nucleoporin_N Beta-prop_Vps41
Other DBs
NCBI-GeneID: 5980841
NCBI-ProteinID: XP_001803919
UniProt: Q0U3F2
LinkDB
Position
Unknown
AA seq 585 aa
MEREYHPRQFEDGPRPRPKLYKAGANPLHIGAVTDYGATTVQWMRNRRPRYKNVPMAEVE
RPTPSYVVDMTPPAARVSSAAESIPAKAVHSSLNKVKHPINVVKWTPEGRRLLTGSTSGE
FTLWNGMGFNFETIMQAHEAAIRCVEYTHTDDWLLSADQTGIVKYWQTNFNNVKEIQAHT
EAVRGLAIAPTDSKFVTCADDTTLKIWDFASSTEESTLTGHGWEVKCVDWHPHKGLLVSG
SKDHQVKFWDPRTGRCLTTLHGHKNPIAKTMFEPTQGHLLATCARDHIARIFDLRMMRDV
LLLKGHDKDIMSMTWHPMHKNLLSTGGYDGAILHHLLDEQNAPDDVPPSISPYDAADPQT
APAQTIYPAHTIKRAHEYTVWSMDWHPLGHILATGSNDRITRFWTRPRPGDTSYIKDRYH
IGDKAAEEEGTWDGRQGRRRRAEEEELEAEDEAEGLVDQKMPSKSSGMPGLPPGLSLPGL
SAAPDGFPGFPPPGMGVPPPPPNFQNGGPVGGQEGGDAGIRRRAPLPEQDDALKEEMRQG
RYRKARFYIDTWRSLTLFAESYIWSFSQKTCSIPKLQTLIHYLRV
NT seq 1758 nt   +upstreamnt  +downstreamnt
atggaacgcgaatatcaccctcgccagttcgaggacggccctcgaccgcgacctaagctc
tacaaagctggagctaacccgctgcacataggagcggtgactgattatggcgcgaccacg
gtgcaatggatgcgcaaccggcgaccgcgctacaagaatgtgcccatggctgaggtcgag
cggccaacccccagctatgtcgtggacatgacacccccagcagctcgagtctccagcgct
gccgaatcaattcctgccaaagccgtgcattcttctctcaacaaagtcaaacaccccatc
aatgtagtgaaatggacgccagagggccgacgactgctcacgggctctacaagtggagag
ttcacgctgtggaacggaatgggcttcaacttcgagaccatcatgcaggcccatgaggct
gccatccgctgcgtcgaatacacacacaccgacgactggctgctgtcagctgaccagacg
ggcatagtcaagtactggcagacaaacttcaacaacgtcaaggagatccaggcgcacaca
gaggcagtgcgggggctggccattgcaccgacagactccaagttcgtcacgtgtgccgac
gacacaacactgaagatctgggactttgcgtccagcacggaggagtcgacgctgacgggt
cacggctgggaggtcaagtgcgtggactggcatccgcacaaggggctgctagtatcaggg
tcaaaggatcaccaggtcaagttctgggatccgcggacaggtcgctgtctcacaacgctt
catggacataaaaacccaatagcaaagaccatgttcgagcctacccaaggacacctgcta
gcaacatgcgcccgtgatcacatcgctcgcatctttgacctccgcatgatgcgcgacgtt
ctcttgctaaaaggacatgacaaggacatcatgtccatgacatggcacccaatgcacaag
aacctgctgtccacgggcggctatgacggtgctatattacaccacctcctcgacgaacaa
aatgcacccgacgacgtgccaccctctatctccccctacgacgcggccgacccgcagacc
gcgcctgcgcaaaccatctaccccgcgcacaccatcaagagagctcatgaatacaccgtc
tggtccatggactggcacccactaggccacattcttgcgaccggtagtaacgaccgcatc
acacgcttctggacccgaccacgaccaggcgacacgagctacatcaaagaccgctaccac
attggcgacaaggcagccgaagaagaaggcacatgggatgggcgacagggccggcgacga
cgcgcagaggaagaagaactcgaagccgaagacgaggccgaaggtctggtcgatcagaag
atgccttccaagagctccggcatgcctggcttaccgcccggtctctccctaccaggtctt
tccgcagcaccagacggcttccctggtttccctcctccaggtatgggtgtgccgcccccg
ccgccgaatttccagaatggaggaccagtgggtggacaggagggcggggatgcagggatc
aggcggagagcgccgctgccggagcaggatgatgcgttaaaggaggagatgaggcaggga
cggtacaggaaagctagattctacatcgacacttggaggagtttgacactctttgctgag
tcatacatctggtccttctcacagaagacctgttcaataccaaagctccagaccctgatc
cactacctacgcgtctag

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