Parastagonospora nodorum: SNOG_14068
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Entry
SNOG_14068 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pno
Parastagonospora nodorum
Pathway
pno03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SNOG_14068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_14068
Enzymes [BR:
pno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
SNOG_14068
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
SNOG_14068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
SRPRB
AAA_16
AAA_35
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
5981191
NCBI-ProteinID:
XP_001804268
UniProt:
Q0U2G5
A0A7U2I261
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MLSLPGLNLAPQPAEPLNAPTSTVTRTQDLAANTEYRFEVSFARTLTIKLQSGTAEFFGT
ELAPSTTYSFQGTKGAVFTWHGCKLEIGGEVESDYVAEETPMMSCANLHFALELLRDQSV
SSGSAEMGPRVLVVGPEHSGKTSLVKVMTSYAAKTSRQPMVVNLDPRQGMLSIPGSFSAA
AYSSIVDIEEGWGSSPISGPSPIPVKMPLVYHYGLKDPEEGKVFKPLVTRMALAVTSRLE
EDKLSKQAGFIIDSSGAISQGRNGVYENIEHIVSEFSVNVLITLGSERLYSDLSRKYRNR
DPSESVNVIRLDKSGGCVNRPEEYMKALRHAQVREYFFGHGDNTLAPSSQTCDFGDLHIF
QIVEGDEGALYRSGDYDEYDPSNVSLASIYTRVTPSPSLQNSLLAITTASPTDSQDVIRD
SSVKGYIYVADVDEAKKKVRLLSPQPGMIPGNAMVLGTWPEDVPGLVG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctctccctaccaggcctgaacctggctccacagcccgccgaaccgctcaacgcccct
acatccaccgtcacgcgcacgcaagatcttgctgcaaacaccgaatatcgcttcgaagtc
agctttgctcgcacgctgactatcaagctacagtctggcactgcagagttcttcggcacc
gagctcgcgccatccacaacgtacagcttccaaggcacgaaaggcgcggtttttacgtgg
catggctgcaagctggagattggtggcgaagtcgagtcggactatgttgcagaagagacg
cccatgatgagctgcgcgaacttgcattttgcgctggagctgctgagggaccagagtgtg
tccagtggaagcgcagagatgggtccaagagtgctggttgtcggaccagagcactctggc
aaaacgtcactggtcaaggtcatgacatcgtacgccgccaagactagtcggcaaccaatg
gtcgtcaatctcgacccgagacagggcatgctcagtatcccgggctctttctcggctgct
gcgtactcgtcaatagtagacatcgaggaggggtggggcagtagtccaatttcaggacct
agcccaataccagtcaaaatgccgttggtgtatcactacggactcaaggacccagaggaa
gggaaagtgttcaagccactcgtgacacgcatggcattggcagtcacaagtcgactggag
gaggacaagttgagcaagcaagctggcttcatcatcgatagctcgggcgctattagccag
ggaagaaatggcgtctacgagaacatagagcatattgtttccgagttttctgtgaacgtc
ctcattacactcggctccgaacgcctctattcagacctctcgcggaaataccgaaaccgc
gatccctccgaaagtgtcaacgtgatccgcctcgacaaatccggtggctgcgtcaaccgc
ccagaagaatacatgaaagcacttcgacacgctcaagtacgagagtacttcttcggccat
ggtgataacacgttggcgccgagtagtcaaacgtgtgactttggagacttgcacattttc
cagattgtggaaggtgatgaaggagcgctgtatcgctcgggtgactacgacgaatacgac
cctagcaacgtgtcattggcgagcatatacacgcgtgtcacgccatcaccttccctgcaa
aactcccttttggcaatcacaaccgcttcgcccacggattcccaggatgtgattcgcgac
tcgagcgtgaagggatacatctatgttgccgatgtagacgaggcaaagaagaaagtccga
ctgttgagtcctcagccaggcatgattccagggaatgcaatggtactgggcacttggccg
gaggatgtgcctggtctggtggggtag
DBGET
integrated database retrieval system
