Parastagonospora nodorum: SNOG_14194
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Entry
SNOG_14194 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pno
Parastagonospora nodorum
Pathway
pno03440
Homologous recombination
pno03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SNOG_14194
03450 Non-homologous end-joining
SNOG_14194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pno03032
]
SNOG_14194
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_14194
DNA replication proteins [BR:
pno03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
SNOG_14194
DNA repair and recombination proteins [BR:
pno03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
SNOG_14194
BRCA1-C complex
SNOG_14194
NHEJ (non-homologous end-joining)
MRX complex
SNOG_14194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
SbcC_Walker_B
AAA_13
AAA_15
AAA_29
CENP-F_leu_zip
Phage_GP20
AAA_22
ABC_tran
DUF6011
AAA_16
Motif
Other DBs
NCBI-GeneID:
5981316
NCBI-ProteinID:
XP_001804393
UniProt:
Q0U227
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MSRIDRLMIQGIRSFGPERGETIKFDPPLTLIVGWNGSGKTTIIECLRYATTGDLPPHSK
TGGAFLHDPKLQDEKEIMAQVKLSFRSTSGVRMVATRSMQVTVKKTGRSQKTLEGSLLMK
KDTENHSISTRVAELDQIIPQYLGVPKAILDNVIFCHQEDSTWPLSDATTLKKKFDEIFE
AMKYTKAIDNIKMIRKNRNIQLGQLKIIEGHAKEDKSRAFKSQTRQAELYDAIETLRKEY
VVIDEEVTEAQEKAREAYDHSVRYSRIVNDLEFKRTTFDANKQSVAALEDNLTHMAESDD
ELQSMLDQYKQRVETYATQNDEHRHEYADLKDALEVTRESLGVKQSEIGKYEAQKEQYDR
QLVQRETLIKEAAKRHDIRGYDYDITDKQVADFKQILSKMSRDQNRALERARQESQKDLK
EAQDDLNQLNTRKSGASQSKESARSQIANNDKRISDLQKAMVQIKADEGSEVVLQDKKRD
TEEQLQNASAASSSERYEERVQEASNNMRTLEDKKERLTNELGEATKQAKESASIDYARN
ELQSAQHSLTTMKKVHNERISELVDSDWDPATLETSYQQTLSEKASKVKEATSRRDISQS
KLDKINFQLSSLESQLKKKRSELRQYEQTVTKAIQRDDISDFNETLEQLEADYEGVSTDA
AKFAANAEYMRSCLESARKHNVCRLCERELHDDRSQKFTIEGFYSKLESIIAKAESAMKG
ENPEELLEELEQARNAKPSYELALRLRDTEIPALQIDMSKLTSERENVNKQLEDQDSIVH
ELEAERQEVESMSKEVQSIVGYYNKVHELEVQIKDLAQKQKTAGLSRGIDAVQSDLKTIT
DDSRNARNVLEQLTAARDKSRNHITSLELSVRDINAELNNAQSKLKEKRALGARIEEFKT
ENNKQRELIRGYDKDIEGLVPEIEQAQYKYDDINRRGNERVQRAHDEASKLSDSLRQLSQ
ADEEITAYIQRGGPEQLARTHREIENLQGDLARVESEMMDVMRKIKKIEDSVRDVEMTKR
SISDNLRYRKAKRSLETLQADIEKLEAHGAERDQAHYTREAKHWDDQYHSLNTTKTSIER
DMKNKDDQLTELMKEYEDIYQNADHQYKEAHLKVETTKAAIEDLGRYAGALDKAIMQYHT
LKMEEINRIIAELWTNAYQGTDVDTIRIASDSDGKGNRQYNYRVVMSKQDTEMDMRGRCS
AGQKVLACLVIRLALAECFGTNCGLIALDEPTTNLDQQNIKGLAESLSQIIDMRRKQSNF
QLVVITHDETFLSAMNCSEYADHYFRESKIEQQDIHEVS
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaatcgatcggttgatgatccagggcatccgctccttcggtccagagcgcgga
gaaacgatcaaattcgacccaccacttacccttattgtcggctggaatggctccggcaag
acaactatcattgagtgcctgcggtatgccaccaccggtgatttgccaccacacagtaag
accggtggcgccttcctccatgaccctaaacttcaagacgagaaggagatcatggcgcag
gtcaagctctcctttcggtccacatccggcgtgcgcatggtcgccacgcgaagtatgcag
gttacggtcaagaagactggtagaagtcaaaagacgctggagggctcgctcctcatgaag
aaggacaccgagaaccactccatatcgacccgtgttgccgaattggaccagatcatccca
cagtatctcggtgttcccaaggccatcctggacaacgtaatattctgccatcaagaagac
agcacgtggcccctgagcgacgccacgaccctcaaaaagaagtttgacgagatcttcgag
gctatgaagtacaccaaggccatcgacaacatcaagatgatccggaagaatcgcaacatc
caacttggtcagctgaaaattatcgaaggccatgccaaggaggacaagagccgtgcgttc
aaaagtcaaacccggcaagctgagctctatgatgcgatcgaaacgcttcgaaaagaatac
gtggtcattgacgaagaagtcacagaggcccaggaaaaagctcgcgaggcgtatgaccac
tctgttcggtattctcggatcgtcaatgatcttgagttcaaacggaccacgtttgatgcc
aacaaacagagcgttgcagcgctcgaggataatctgacgcacatggctgagtcagatgac
gagctccagtcaatgcttgatcagtacaagcagcgcgtcgagacctatgctacgcaaaac
gacgagcaccgacatgagtatgcggatctcaaagacgctctagaggtgacgcgcgagtcc
ctcggcgtgaaacagagcgagatcggaaaatatgaagctcagaaggagcagtacgatcgc
caacttgtgcagcgcgagactctgattaaagaggctgcgaagcgtcatgacattcgcggt
tatgattatgatatcacggacaagcaagttgcggactttaagcaaatcctcagtaaaatg
tctcgagatcagaaccgagcgcttgagcgggcgcggcaagagtcgcaaaaggacttgaag
gaagctcaagacgatctcaaccagctcaatactcgcaagtcgggtgcttcgcagtccaaa
gagtcggcaaggtcacagatcgccaacaatgacaagcgtatctcggacttgcagaaggcc
atggttcagatcaaggcggacgaaggaagcgaggtcgttttgcaggacaagaagcgtgat
actgaggaacagttgcagaacgcgtcggcggcatcatcgtccgagcgttatgaggagaga
gtacaagaggcttccaacaacatgcgcacgctggaagacaagaaggagcggctaacaaac
gagcttggcgaagccacaaagcaggccaaagaatctgcttctatcgactatgctcgcaac
gagttgcaatctgcccaacacagtctcacgacgatgaagaaggtacacaacgagcgcatc
tcggagcttgttgattcagattgggacccagctacacttgagacctcgtaccagcaaaca
ctttccgaaaaggctagcaaggtgaaggaggcgacctcacgccgggacatctctcagtcc
aagctcgacaagatcaacttccagttgtccagcctggagtcgcaactgaagaagaagcgc
tctgagctgcggcagtatgagcaaaccgtgacgaaagcaattcagagggacgacatctct
gacttcaatgaaacccttgaacagcttgaagctgactacgaaggagtctccactgacgct
gcgaagttcgcagcgaatgcggagtacatgcgctcatgtctagagtctgctcgcaaacac
aacgtatgccgtctttgtgagcgagaactacatgacgaccggtcacaaaagttcaccatc
gagggcttttacagcaagttggagtcgatcattgcgaaagcagagagcgccatgaagggt
gaaaacccagaagagcttctcgaggagcttgagcaggctcgaaatgcgaagcccagctat
gagcttgcacttcgtctacgcgacaccgaaattcccgccctacagatcgatatgtcaaaa
ttgacatcagaacgtgagaatgtcaacaagcagcttgaggatcaagacagcatcgtgcat
gaacttgaggccgagcgccaagaggtagaatccatgtcgaaggaggtccagagcatcgtc
ggctattacaacaaggtccacgagcttgaggtccagatcaaggacctcgctcagaaacag
aagacagctggcttgtcgcgcggcatagatgccgttcagagcgacttgaagaccatcacg
gacgacagccgcaatgctcgcaacgtgcttgaacagctcaccgcagcccgagacaagtcc
cgtaaccatatcacgagccttgaacttagcgtccgtgacatcaatgccgagctgaacaac
gcccagtcgaagctgaaggagaagcgagcactaggcgctcgcatcgaagagttcaagacg
gagaacaacaagcaacgcgagttgattcgtggctatgacaaggacatcgagggtctggtt
ccggagattgaacaggcgcagtacaagtacgacgacatcaaccgccgtggcaacgagcgc
gtccagcgtgcacacgacgaggcttccaaactttcggacagcttgcgtcagctcagccaa
gccgacgaagagatcacggcatacatccagcgcggtgggcctgaacagcttgctcgcacg
caccgcgagattgagaatctccaaggtgatctggcccgggtcgagtcggaaatgatggac
gtaatgcgcaagatcaagaagatcgaggatagtgtccgcgacgttgagatgaccaagcgt
tccatcagtgacaacctccgctaccgcaaagccaagcggtctctcgagacccttcaagcc
gacatcgagaagcttgaagcccacggcgccgagcgcgatcaagcccactatacccgcgaa
gccaagcactgggacgaccaataccactcgctcaacaccaccaaaaccagcatcgagcgc
gacatgaagaacaaagatgaccaactcaccgagcttatgaaagagtacgaagacatctac
caaaacgccgaccaccagtacaaagaagcccacctcaaagtcgaaaccaccaaagccgca
atcgaagatctgggccgctacgccggcgccctggacaaagcaatcatgcaataccacacg
ctcaaaatggaggaaatcaaccgcatcatcgccgagctctggacaaacgcctaccagggc
accgatgtcgacaccatccgcatcgcctcggactccgacggcaagggcaaccgccaatac
aactaccgcgtcgtcatgtccaagcaagacacagaaatggacatgcgcgggcgctgcagt
gcgggccagaaagtcctcgcgtgcctcgtcatccgcctcgcgctggccgaatgcttcggc
acgaattgcggcctgatcgcgctcgacgaacccaccaccaacctcgatcagcagaacatc
aagggtctggcggagagtctgagccagatcatcgatatgaggcggaagcagagtaatttc
caactcgtggtgattacgcatgacgagacgtttctgagcgcgatgaattgctccgagtat
gcggatcattactttagggagagtaagattgagcagcaggatattcatgaggtgagttag
DBGET
integrated database retrieval system
