Parastagonospora nodorum: SNOG_15115 Help Entry SNOG_15115        CDS       T01161                                  Symbol SNOG_15114 Name (RefSeq) hypothetical protein   KO K12880   THO complex subunit 3 Organism pno  Parastagonospora nodorum Pathway pno03013   Nucleocytoplasmic transport pno03040   Spliceosome Brite KEGG Orthology (KO) [BR:pno00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     SNOG_15115 (SNOG_15114)   09122 Translation    03013 Nucleocytoplasmic transport     SNOG_15115 (SNOG_15114)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pno03019]     SNOG_15115 (SNOG_15114)    03041 Spliceosome [BR:pno03041]     SNOG_15115 (SNOG_15114) Messenger RNA biogenesis [BR:pno03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      SNOG_15115 (SNOG_15114) Spliceosome [BR:pno03041]  Complex C   Other components    EJC/TREX     SNOG_15115 (SNOG_15114)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     SNOG_15115 (SNOG_15114) SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 WD40_CDC20-Fz adh_short_C2 Beta-prop_EML_2 adh_short WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_1st WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd DSE1_N KR Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR75_1st CFAP251_N Beta-prop_SPT8 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Cytochrom_D1 PD40 Beta-prop_SCAP WD40_like Beta-prop_WDR41 Motif Other DBs NCBI-GeneID:  5982206 NCBI-ProteinID:  XP_001805278 LinkDB All DBs Position Unknown AA seq 669 aa AA seqDB search MFVYLARELIGTLRIVHWPYQRQWRPPRAPAPSAKTSSPKSSPSSKHPPTSTTCAPTPPS PPRTTSAASPGTHHGTFIATGAADRTLRIWNPEKSNVKNSTELRTPGASAVTSLERVAFH PINENELASCGSDGMVRFWDIRSKASVGEVKVGETPFTLAWSPDGSEIVAGRKDNVLASI DRTALRVLAEHRQPLQTNQCVFDWSGNHLFMTGGDGSVKIVDYPSFEPVLTLNAHTSSCY AITMSPSGEYMAAGGGDALVSLWDTQEWICVRTFDLTKELIKSIDFSFDGSYITAGSDDK EEKKLRIAHVETGEVVHSIDIPTPASHVAWHPCRYILAYSADQQGLKIWYVLKLQSYPSV PRIHDNNSPLPGLGAAIASALYQNGAAKVYILGRRRNVLEKAKREIVSSPHGSLASDSVI QEIVCDVTDLDSIKVAVETIKKDVGFVDVLINNAGVLGPKNGQDIYKAESIEQLADTMTK DWDGWANAFAINTQAVIGVSAQFLPLLEAANTRRGFAPGKVTGTGIARAHDKSKLSQIGT SEDDDRMAQIITVASVASYMRWVSAGLAYNATKSAAAHLAKMMSTFLAEWGIRSNIIAPG PYPSEMTASNPAAYGTGQIPQGRMGGLGDIAGTVLYLVGRGGAYVNGCVQVTDGGRMGGF SGCLLGDIR NT seq 2010 nt NT seq  +upstreamnt  +downstreamnt atgttcgtatatctggcgcgtgagcttatcggaacgctccgaatcgtccattggccctac caacgacaatggcgccccccacgcgcgcccgctccgtcagcaaagacgtcttccccaaag tcttctccaagctcaaaacatccgcctacatcgacaacctgcgccccaacgcctccatct cctcctcgcactacatccgcagcatctcctggaacgcatcacggcacgttcatcgcaacc ggcgccgccgaccgcaccctgcgcatctggaacccggaaaagtcgaatgtgaagaattcg acggagctgcggacgcccggcgcgagtgcggtcacgtcgctggagcgcgtggcgtttcac ccgatcaatgagaatgagctggccagctgcgggagtgacggcatggtcagattttgggat atcaggagcaaggcaagtgtgggggaggtcaaggtcggggagacgccgtttacgctggcg tggtcgccggatgggagtgagattgttgcggggcggaaggataatgtgctggcatcgatt gaccgcacggcacttcgcgtgcttgcagaacaccgacaaccgcttcagacgaaccagtgc gtgttcgactggtcgggcaatcacctcttcatgacgggcggcgatggaagtgtcaagatt gtggattacccgtccttcgaacccgtactcacgctcaacgcccacacgtcctcgtgctac gccatcacaatgtcaccgagtggggagtacatggcagctgggggcggagacgcactcgtc tcgctctgggacacgcaagaatggatatgcgtgcgcacattcgacctcacaaaagagctc atcaagagcatagacttttcgtttgatggcagctatatcacggcgggctcggacgacaaa gaagagaagaagcttaggatcgcacacgtggagacgggagaggtggtgcattcgatcgac atccctacgccggcatcgcatgtcgcgtggcatccatgtcggtatatcctggcatactcg gcggatcaacagggactgaagatttggtacgttctcaagctccagagctacccctctgtg ccccgcatccacgacaacaactcaccattgccaggacttggagctgcaattgcttcagca ctttaccagaacggcgccgcaaaggtctacattctcggccgtcgtcggaatgttcttgag aaggccaagagagagattgtatcgtcgcctcacgggtccctagcctccgactctgtcatt caagagatcgtctgcgatgtaaccgatctcgactccatcaaagtagcggttgaaaccatc aagaaagatgtaggcttcgtcgacgtcctcatcaacaacgccggtgtcctcggcccaaag aacggccaggacatctacaaagccgaatccatcgaacagctggccgacaccatgaccaaa gactgggacggctgggcgaacgctttcgcaatcaacacccaggccgtcatcggtgtgtcc gcccagttcctcccgctccttgaagcagccaacacgcgccgcggcttcgcgccaggcaaa gtcaccggcacaggcatcgcgcgcgcccacgacaaatccaaattatcccaaatcggcacg tcagaagatgacgaccgcatggcgcaaatcatcaccgtcgcatccgtggcgtcctacatg cgctgggtttccgcaggcctcgcatacaacgcaaccaaatctgccgctgcgcacctcgct aaaatgatgtccaccttcctcgctgaatggggcattcgaagcaacatcatcgcgcccgga ccgtatcccagcgagatgacggcgagtaatcctgcagcttatggcacgggacagattccg cagggcagaatgggtgggttgggagacatcgcggggacggtgctgtatcttgtggggagg ggcggggcgtatgtcaatggttgtgtgcaggtcactgatggggggaggatggggggtttt tccggctgtttattaggagatatacgttga

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