Parastagonospora nodorum: SNOG_16062
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Entry
SNOG_16062 CDS
T01161
Symbol
SNOG_16061
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
pno
Parastagonospora nodorum
Pathway
pno03420
Nucleotide excision repair
pno04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SNOG_16062 (SNOG_16061)
09124 Replication and repair
03420 Nucleotide excision repair
SNOG_16062 (SNOG_16061)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pno04121
]
SNOG_16062 (SNOG_16061)
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_16062 (SNOG_16061)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pno04147
]
SNOG_16062 (SNOG_16061)
Ubiquitin system [BR:
pno04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
SNOG_16062 (SNOG_16061)
DNA repair and recombination proteins [BR:
pno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
SNOG_16062 (SNOG_16061)
TCR (transcription coupled repair) factors
Cul4-CSA complex
SNOG_16062 (SNOG_16061)
Exosome [BR:
pno04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SNOG_16062 (SNOG_16061)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Penicillinase_R
Motif
Other DBs
NCBI-GeneID:
5983121
NCBI-ProteinID:
XP_001806191
UniProt:
Q0TWY8
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MSANQGTLKRKHSGKTIKELFTTQSKPHAATAAPLSPTKKRSRRELERESSPPADEAATA
RTPPSSMSTADMYHFPSKRGDVVDMTASPDSSPARASAPRSTHGTHGTRKTAPNITFKPT
RKADPAVFLDQTWQKIDGALDTVFAHAAVDFSLEELYRGVENLDVKERLVAKCRDYVGAS
LTAKVHESLGGGGNVEVLRATLQAWAVWNEQMKYLDWIFCYLDRAYLLPRHESLRDLSID
LFRSLVFSHARLNDRIPPIRAGSELDSDMFSKTVNMFHTLHVYTKHFEPRLMELSQTFVM
NWADEESEKPLPEYIKSAKSLMDRELSRVAKFGLPNTTRRDLLTLLEDHLISRKESRLTN
QDELADLLEANAVEDLQLLYTLLERRKLGASLRPGFVKWIDDEGTAVVFNEKEQENMVVH
LLTLKRQLDTFWKVSFHRNPELGHGLRESFEAFMNKTKKTNASWGTDNSKTGEMIAKYVD
MLLRGGAKAIPASLSRRTEKPVVAEAEEDNEDAMFDEDTEVDNQLDQVLDLFRFVHGKAV
FEAFYKKDLARRLLMGRSASADAERSMLSRLKTECGAGFTANLEQMFRDIELSREEMASY
KSISEERNERLAVDLNVSILSASSWPTYPTVTVIIPPQIKQAIDKFEAHYKAKHSGRKLE
FKHALAHCQLKAKFPKGSKELVVSSFQAIVLLLFNGLKTEEHMEYNYLKEATGLPPAELN
RTLQSLACAKIRPLTKHPKGREINPTDTFTLNANFTDPKYRIKINTVQLKETKEENKETH
ERVAADRNYETQAAIVRILKARKRISHAELVAETIKATRSRGTLEVSGIKKNIDRLIEKE
FLEREEDNAGWYAYIA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaatcaagggacgttgaaacggaagcactcgggcaagacgatcaaggagctc
ttcaccacgcaatcgaagccccacgccgccacagccgcaccgctgtcgcccaccaagaag
cgctcacgacgcgagcttgagagggagagctccccgcccgccgacgaagccgccacagcg
cgcacgccgcccagcagcatgagcaccgccgacatgtaccacttccccagcaagcgcggc
gacgtggtggacatgacggcgagccccgacagcagcccggcgagagcaagcgcgccgcgc
agcacgcatggcacgcatggcacccgcaagacagcgcccaacataactttcaagcccacg
cgcaaggccgaccccgccgtgttcctcgaccagacatggcagaagatagacggcgccctc
gacaccgtcttcgcccacgccgccgtcgacttcagcctcgaggagctgtaccggggcgtc
gagaacctggacgtcaaagaacgcctcgttgccaagtgcagggactatgtcggcgccagc
ttgaccgcgaaggtgcacgagagcctggggggagggggcaatgtcgaggtgctgagggcg
accttgcaggcatgggccgtctggaacgagcaaatgaaatacctcgactggatcttctgc
tacctcgaccgcgcctatctgcttccacgccatgaatccctccgcgacctctccatcgac
ctcttccgctccctagtcttctcgcatgcgaggctcaacgaccgcattcctccgatccgg
gccggcagcgagctcgacagcgacatgttctccaagactgtcaacatgttccacaccctt
cacgtctacacaaagcacttcgagccgcgcctgatggagctcagtcagacattcgtaatg
aactgggctgacgaagaatccgagaaaccgctgccagaatacataaagagcgccaaatcc
ctcatggaccgcgagctttcgagagtggcaaagtttggcctgcccaacaccacacgccga
gacttgcttacgctgctggaggaccacctgatatcgaggaaggagtccaggctgaccaat
caagacgagctggccgatctcctcgaagcaaatgccgtcgaggacctccaactactatac
acactgctggaaaggcgcaagctcggtgcaagcctacgcccaggttttgtcaaatggatc
gatgacgagggtacggcggttgttttcaacgagaaagagcaggaaaatatggtcgtgcat
cttctgacactcaaacgtcagctggacacattctggaaagtgtcattccatcgtaatccc
gagcttggccatggcctgcgcgagtccttcgaggcctttatgaacaagacgaagaagacg
aacgcaagttggggcacagacaattccaagacgggcgagatgattgccaaatatgttgat
atgctactgaggggtggtgccaaagccatccccgcgtccctgagtcggaggacggaaaag
cctgttgtcgctgaagcagaagaggacaacgaagatgccatgtttgatgaggacactgaa
gtcgataaccagcttgatcaagtgcttgaccttttccgatttgtccatggcaaagctgtc
ttcgaagccttttacaaaaaggatctcgcgaggcgtttgctcatgggcagaagtgccagc
gcagatgcagagcgtagcatgctgtcaagactcaagactgaatgtggcgctggcttcaca
gcaaaccttgagcagatgttccgtgacattgagttgtcgcgcgaagagatggcttcttac
aagagcatctccgaggagcgtaacgagaggctagccgttgaccttaatgtcagcatcctg
tccgcctcctcatggcccacctatcccactgtaaccgtcattattccgccacaaatcaag
caggctatagacaagttcgaggcacattacaaagcaaagcattccggccgcaagctcgaa
ttcaagcatgcccttgcgcattgccagcttaaagcaaagtttcctaaaggtagcaaagag
ttggttgtctcttccttccaagccatcgttcttctgctcttcaatggtttgaagacggag
gagcacatggagtacaattacctcaaggaagctacgggtctccctccggcggaactcaat
cggaccctccaatctcttgcctgcgccaagattcgaccactgaccaaacaccccaaaggc
cgagagattaaccccaccgacactttcacactcaacgccaatttcacggaccctaaatac
cgcatcaagatcaacacagtgcagctcaaggagaccaaagaagagaacaaggagacgcac
gagcgcgttgctgcggatcgcaactacgagacacaggccgcgattgtgcgcatcttgaag
gctaggaagagaattagtcacgcagaactggttgctgagacaatcaaagcgacgaggagt
aggggcacgctagaggttagcggaattaagaagaacattgacaggttgattgagaaggag
ttcttggagagggaggaggacaacgcggggtggtatgcttatatagcataa
DBGET
integrated database retrieval system
