Parastagonospora nodorum: SNOG_16102
Help
Entry
SNOG_16102 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K11374
elongator complex protein 2
Organism
pno
Parastagonospora nodorum
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pno03016
]
SNOG_16102
Transfer RNA biogenesis [BR:
pno03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
SNOG_16102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_2nd
WD40_MABP1-WDR62_1st
WD40_Gbeta
Beta-prop_WDR41
RMC1_N
Motif
Other DBs
NCBI-GeneID:
5983160
NCBI-ProteinID:
XP_001806230
UniProt:
Q0TWH0
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MELLRKVQERTNLNSIVIGTPPSLDISDFTLSGIGEVVSLACGNRNPAAADWDEDGLQLL
AFGADNSIALWDPQARSDTFATGASDGTVKIWKLVHDATYSSVDVELVQNITLSPNYFPL
NLALAHLDDQSIILAAAGTRSTIQIFVSHHAEFQLSATLTGHEGWIRALAFTREVSNDSS
DLLLVSASQDKYIRLWRIHRGNELPAASSALNDPSLGGLGKSLSNKAHWIESRASKFSVT
FEALLLGHEDWIYTASWRHRDGKLQLLSTSEDNSLAIWESDPTSGIWICTTRLGEISAQK
GSTSATGSAGGLWIGLWSPDSNSIVALGRTGSWRKWSYSITQDTWTQEVAITGHVREVKG
IHGYDLNCIDAISTSQFISGADEKLLRVFDEPKGVAAMLKRLCDIQITNTGSELPDAANI
PVLGLSNKAIQAVDDSLPIEDGDDDERETVDPASIIRKSTLNFSHPPFEDHLARHLLWPE
TEKLYGHGYEISAVAVSRDGSLVATACRASSIDHAVIRLYDTKDWLEVKPPLRAHSLTVT
ALQFSPDDKYLLSVGRDRQWVIWERGAEASQYTLKHSNPKGHTRMILDASWTPLEQPTFM
TAGRDKSIKTWQVTDADVQLKGTATVGSAVTAVACSSQLHQGSVLFAFATDNGEIGICKA
ATDALDKVDITMIKSELCPAKTVNQLVWRPARTQDQQQVAVVSDDTSMRLYDIKAV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaattattgcgcaaggtgcaggagcgcacgaacctgaactcaatcgttatcgggacg
ccaccatcgttggacatttctgatttcacgctgtcgggaatcggcgaggtggtgtcattg
gcatgcggaaatcgtaaccccgcagccgcagattgggacgaagacgggctacaattgttg
gcttttggtgccgacaactcgatcgctctctgggatcctcaggcaagatcagataccttt
gcgactggtgcatcggatggcacagtaaagatatggaagctcgttcacgatgccacgtac
agttctgtcgatgttgaactggtccaaaacatcactctctccccaaattacttcccatta
aaccttgcgctagcccatttggatgatcaatcaatcattctagcagccgcaggtactcgg
agcactatccagatcttcgtttctcaccatgccgaattccagctttctgccactctgact
ggacacgagggttggattcgcgccctagcatttacaagagaggtttcgaatgattccagc
gatctgctgctggtgtcagcaagtcaggacaagtacatacgtctctggagaatacaccgt
ggcaacgagctccctgccgcaagtagcgctctcaatgacccctctctcggtggccttggc
aagtcactttcgaacaaggcacattggatagagtcacgggcttcaaaattctcggtgact
tttgaagcgttactgctcggacatgaagactggatttacacagcttcctggcgacaccga
gatggcaagctacaactgctctcaacatccgaagataattctcttgctatctgggagagt
gatcctacatcgggtatctggatatgcactacaagactcggggagatcagcgcgcagaag
ggctcgacaagcgccacaggaagtgccggtggactctggatcggactttggtcgccagac
agtaattccatcgtagcccttggacgcaccggtagctggaggaagtggtcctactccatc
acacaagacacgtggacgcaagaagtcgccataacagggcatgttcgagaagtcaagggg
atccacggttacgatcttaattgcatcgacgccatctccacctcgcaattcatctctggg
gcggatgagaagctgctgcgcgtgtttgatgagcccaaaggagttgcagcgatgctcaaa
aggctatgcgatattcaaatcacgaataccggtagcgagctgcctgatgcggcgaacatc
ccagtcctaggcctctcgaacaaagccatccaagcggtggatgacagcctgcctatcgaa
gacggagacgacgacgaacgtgaaaccgtagatcccgcatctataattcgaaaatcgact
cttaacttcagtcacccaccattcgaggatcacctagcaagacatctgctctggcctgag
accgagaagctgtatggccacggctacgagatctcggcggtagcagttagccgagacggc
agtctcgttgcgacggcctgtcgcgcgagctcgatagaccacgcagtcatacgtctctac
gataccaaagactggttggaagtgaagccgcccctaagagcacattcgctcacggtgacc
gcattgcagttttctccagacgataagtatctcctgagcgtcggtcgagataggcagtgg
gtcatttgggagcgtggcgccgaggcttcgcagtacaccctcaagcattcaaaccccaaa
ggacatactcgaatgatattggatgcatcttggacaccgcttgagcagccaactttcatg
acagctgggagagacaagtcgatcaagacttggcaagttacagacgcagatgtacagctc
aagggtacagcaaccgttggatctgcggtcacggctgtggcgtgtagtagccagctgcat
cagggcagcgtcctcttcgcctttgctaccgataatggtgagatcggaatatgtaaggct
gctaccgatgcactggacaaggtggatatcacgatgatcaaatcggagctctgtccggca
aagactgtcaaccagctggtgtggaggccagctaggacacaagatcaacagcaggtcgca
gtcgtgagtgacgacacgtcgatgcggctgtatgatatcaaggcagtctaa
DBGET
integrated database retrieval system
