KEGG   Paenibacillus naphthalenovorans: IJ22_03470
Entry
IJ22_03470        CDS       T04167                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
pnp  Paenibacillus naphthalenovorans
Brite
KEGG Orthology (KO) [BR:pnp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pnp03016]
    IJ22_03470
Enzymes [BR:pnp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     IJ22_03470
Transfer RNA biogenesis [BR:pnp03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    IJ22_03470
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: ALS20736
UniProt: A0A0U2M162
LinkDB
Position
complement(347198..347782)
AA seq 194 aa
MIEPRWFVAIPIPDEIRTVLKENMDVMKKPYAFQKWVHPQDLHITLKFLGAASATARRQI
VQSLTALTSSFPAFDLRLKGWGTFGRPASPGILWAGVGGDLQRLFALQAGVEHAALQAEF
EREKRPYSPHITLARRYNGKTKFPSDPWTAESANPDASLHAWQVQKVVLYRSHLHQNPMY
EEIEYFPLVYGNKG
NT seq 585 nt   +upstreamnt  +downstreamnt
atgatcgaaccgcgttggtttgtcgccatccctattcctgacgaaatacgaaccgtcctg
aaagagaacatggacgtcatgaagaaaccgtatgcttttcaaaagtgggtccatccccaa
gatctgcatatcacattgaaatttttgggagcggcctcagcgacagcccgccgtcaaatc
gtgcaaagcttaaccgcacttacctcgtctttccctgcttttgacctgcgtctaaaagga
tgggggactttcggccgtcccgcttcccccggcatcctctgggcaggagttggaggcgat
ctgcagcgtctgtttgctctgcaggccggagtcgagcacgcagcgctccaggcggaattt
gagcgtgaaaagcgcccttacagccctcatatcactctggcacgaagatataatggaaaa
actaaattcccgtcggatccatggacagccgagtccgcaaatcccgatgcctccctgcat
gcatggcaggtacaaaaagtggtcttgtaccggagccatttgcaccagaatccgatgtac
gaagaaatagagtattttccgctggtttatggcaataagggctaa

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