Paenibacillus naphthalenovorans: IJ22_07160
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Entry
IJ22_07160 CDS
T04167
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pnp
Paenibacillus naphthalenovorans
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnp03016
]
IJ22_07160
Enzymes [BR:
pnp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
IJ22_07160
Transfer RNA biogenesis [BR:
pnp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
IJ22_07160
Prokaryotic type
IJ22_07160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
ATP_synth_reg
InlJ_IG
Motif
Other DBs
NCBI-ProteinID:
ALS21100
UniProt:
A0A0U2UD14
LinkDB
All DBs
Position
718208..719137
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AA seq
309 aa
AA seq
DB search
MLIQPQENLQPEFHEHLKVILLGTGSPRAFYGRAKPGVAVLAGNKTFLVDCGGGVVDQLI
KAGVMPQRISDVLFTHHHYDHNGGFFDVFITSWRTHITPERVFEGRSTPMHVYGPETTKE
IIGKMRESFEFDVKLRVSYNLSDEAGARIEYTERNEGVVYDQDGIKITAFEVDHRPVYPA
VAYKFEFNGKSVVISGDTIPVSNMIRQSQGVDLLVHEAYNKEWLDELIHKYPDYDKALSN
PAKYHTTTLEAAEIAKQAGVKHLVLTHHIPAPAANENAEQEYMKGMRDIFNGTITVGRDL
MTFDLGNEV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctaattcaaccacaggagaatctgcagcctgagtttcatgagcatttaaaagttatt
ttattgggtacgggttcgcctcgagccttctacggaagggctaagccgggagtcgccgta
ttagcgggaaataaaacctttttagtcgactgcggcggtggcgttgtggatcaattgatt
aaagcgggtgtcatgccgcaacggatttccgacgttttgttcacccatcatcactatgat
cacaatggcggttttttcgatgtctttattacaagctggaggacgcatattaccccggag
cgtgtattcgaaggacgctcaacgcctatgcatgtatacggacctgaaacgactaaagaa
atcattggtaaaatgagggaatcgtttgagttcgatgtgaagctgcgggtaagttacaat
ctgtcggatgaagcaggagcacggattgaatatactgaaagaaatgaaggcgtcgtctat
gatcaggacgggattaagattacagcctttgaagtggatcatcgtccggtctatccggcg
gttgcgtacaaatttgaattcaacgggaaatcggttgttatttccggagatacgatccct
gtgtccaatatgattaggcaaagccaaggcgttgatctcttggtgcacgaagcttataac
aaagaatggttagacgaattaattcataaatacccagattatgacaaagcgctctctaat
ccggccaagtatcataccaccacattggaggcagccgaaattgcgaagcaagcaggggtc
aagcatctcgtgcttactcatcatattccggcgcctgcggctaacgagaatgccgagcag
gaatatatgaagggtatgagagacatttttaacggaacgatcacggttggacgtgacctc
atgacgtttgatttgggtaacgaagtatag
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