Paenibacillus naphthalenovorans: IJ22_09090
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Entry
IJ22_09090 CDS
T04167
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
pnp
Paenibacillus naphthalenovorans
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnp03016
]
IJ22_09090
Enzymes [BR:
pnp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
IJ22_09090
Transfer RNA biogenesis [BR:
pnp03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
IJ22_09090
Prokaryotic type
Methylthiotransferases
IJ22_09090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ALS21291
UniProt:
A0A0U2ILR5
LinkDB
All DBs
Position
919522..920928
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AA seq
468 aa
AA seq
DB search
MATVAFHTLGCKVNFYDTEAIWQLFKQEGYEQVDFESTADVYVINSCTVTNTGDKKSRQM
IRRAIRRNPEAIIAVTGCYAQTSPAEIMAIPGVDLVIGTQDRDKIMPYIKQLEQERKPIN
AVRNIMKTRTFEELDVPDFADRTRAFLKIQEGCNNFCTFCIIPWSRGLMRSRDPQSVLKQ
ARMLVDAGYQEIVLTGIHTGGYGEDMEDYSLAKLLWDLDKVEGLKRIRISSIEASQITDE
VLEVLQKSDKMCRHLHIPLQAGDNDVLARMRRKYTTEQFAQKIEHIHRIMPGVAITTDVI
VGFPGETEEMFRNGYRFMEQMKFSEMHVFPYSKRTGTPAARMEDQVDEEIKNARVHELID
LSERMQLDYAKQFVGQVLEVIPERDYKGQQGSGLIMGYSDNYLQLVFEGSEDWIGQICHV
KVTEAGVNECRGEIVRVPEIVSVNPSPRKTAGTSSVDAIPGQAAKAIV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtcgcttttcacacgctgggctgtaaagtcaacttttatgatacggaagcg
atctggcagctgtttaagcaggaaggatacgaacaggtcgattttgaatcgacggcggac
gtatatgtcattaacagttgtacagtgacaaatacaggggataaaaaaagccggcaaatg
atccggcgcgcgatccgcagaaatccggaggcgattatagcggtaacgggctgctacgcc
caaacgtcgcccgccgaaatcatggcgattccgggagtcgatctggtgatcgggacgcag
gaccgcgacaaaattatgccttatataaaacaattggagcaagaacgcaaaccgattaac
gccgtgcgcaacattatgaaaacccgcaccttcgaggaactcgacgtgccggattttgcc
gaccgcacacgcgcttttcttaaaattcaagagggctgcaacaacttttgcaccttctgt
attattccgtggtcgcgcggtctgatgcgcagccgcgatcctcaaagcgtgctgaagcag
gcccgcatgctggtggatgccgggtaccaggaaatcgtgctgacgggcattcataccggt
ggctacggagaggatatggaggactacagcttggccaagctgctatgggatttggataag
gtggagggtttgaagcggatccgcatcagctccatcgaggcgagccaaattaccgatgaa
gtgctggaggtcctgcaaaaatcggacaaaatgtgccgtcacctgcacattccgctgcag
gccggagataatgacgtgctggcgcggatgcgcagaaaatatacgacggagcagttcgca
caaaaaatcgagcacattcaccgcatcatgccgggtgtagcgattacgacggacgtgatt
gtaggctttccgggagaaacggaagagatgttccgcaatggataccggttcatggagcag
atgaagttctcggagatgcacgtatttccgtactccaaacggaccggtacgccggccgcc
cgtatggaggatcaagtggacgaggaaattaaaaacgcccgggtacatgagctcatcgat
ttgtcggagcggatgcagcttgattacgccaaacagtttgtgggtcaagtgctggaggtt
attcccgagcgcgactacaaaggacagcagggcagcggtctgatcatgggctattcggac
aattatcttcagcttgtgtttgaaggcagcgaggattggatcggtcagatatgccatgtg
aaggtgaccgaggccggggtgaatgagtgccgcggcgaaatcgtccgcgtgccggagatc
gtgtctgtgaatccgtccccaaggaaaacggccggcacaagcagtgtcgatgccattcct
ggtcaagcggcaaaagctatcgtatag
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