Paenibacillus naphthalenovorans: IJ22_09150
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Entry
IJ22_09150 CDS
T04167
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pnp
Paenibacillus naphthalenovorans
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnp03400
]
IJ22_09150
Enzymes [BR:
pnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IJ22_09150
DNA repair and recombination proteins [BR:
pnp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IJ22_09150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ALS21297
UniProt:
A0A0U2UHC7
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All DBs
Position
924869..928579
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AA seq
1236 aa
AA seq
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MAFRFVLGRAGSGKTTFCLNEIKQKLMEKPEGRPLIWLVPEQATFQAEYALVSAPELGGT
LRAQVLSFRRLAWRVMQEVGGTARLPIDETGKKLLLHRIIHRNKERLRRFQASADQMGFL
DRLNQLFSEFKRYCITSEGLSGFYSERFGSQSGPSGSLEDKLHDLQLIYAEFQTELSKLY
LDGEDYLTLLARQLGESDYVHGAECWVDGFHGFTPQEFAVLEQLARHAGNVTLTLCLPRP
YVNGEGLHELDLFHPTARTMLELQERLRQQAIHVTDHIVLPDSPPARFRHNPMLAYLEAH
WGDGVKRPFPEPAEVRKGTGSSVRIFAAVSRRAEVEGVARDIVKLVRDEGLRWRDISVSV
RSVEAYGDLLAGTFRDYGIPHFFDQKRSVLHHPLVELIRSALETVLTHWKYDAVFRCVKT
GLLLPFAEDKELQGDRIRIDRLAMDQLENYVLAFGIQGSKWTDPKDWTYSYRTSLEQDDA
EAGDADEAFLTKINACRRAVAGPLGELQKKLREKTAVQDRVQAVYELLIGLRVPDRLEAW
SQSSLHLGEPEKAREHAQVWERVMDMFDQLIELMGEQSVSLELFAELIQTGLESIKLGLV
PPTLDQVLIGSMDRTRSGRVKHMFVLGVNEGVMPAKITESGVLTEAERERLGAAGLQTAE
GSRRRLLDESFLIYCAFCTPSDGLWLSYALADEEGKSLLPSDVIRQIKRLFPQVRERLLL
NDPAPDAASTEQLEYIAHPDKALSLLVVQLKQWMQGAPMSGVWWSVYNWFARQPEFGGRL
SRMVQSLLYTNKAVALSDSTSRRLYGEHIETSVSRMERFVACPFSQFASHGLRLKERRIF
RLEAPDVGQLFHAALSKFAEQVEKEGIDWGALTARESEERAALVVDALAPKLQGEILLSS
KRYLYIARKLKQVIGRAALMLGEHAKRGQFRPIGLEIGFGSGQAIPPLLYELDNGVLMEL
RGRIDRIDRADTERGTLLRVIDYKSSAKMLNMAEVYYGLSLQMLTYLDVILTHAPIWLGT
EAEPAGVLYFHVHNPLLNAKNGLTAEQIDKELKKRFKMKGLLRADPEVIKLMDSSLIGAS
GHSELLPAALKTDGSFYKSSSVASEEQWNTVRRYVRRTIRDIGTSMTDGRIDIEPYRMGQ
STACSHCSFRPVCQFDTQLEGNDYRVLPPIGKDLVWELMEKQTESKSRFRPSASRTAALA
SLEVAASAEDETDQPAVEDGFIPPSGSKDNEGGETK
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttcgttttgtgcttggccgtgccgggagcggaaaaacgacgttttgtctgaac
gaaatcaaacaaaagctcatggagaagccggaggggcgtccgctgatttggcttgtgccg
gagcaggcgacgtttcaggcggagtatgcgcttgtatccgcgcctgaactggggggaacg
ctgcgggcgcaggttctcagctttcgccgtctggcctggcgggttatgcaggaggttggg
gggacggcccgtcttccgatcgatgaaaccgggaagaagctgttgcttcaccggattata
cataggaataaagagcgtctgcgccgatttcaagcgtctgcggatcaaatgggtttcttg
gaccgtttgaatcagctgttcagcgaatttaaacgatactgtatcacatccgaagggctt
agcggattttattcggagcgtttcggatcccagagcggcccaagcggttcattggaggac
aagctgcacgatctgcagttgatttatgccgaattccagactgaactgtcgaagctttac
ctggacggagaagattatttgactctgcttgccaggcagcttggcgaatcggattacgtt
catggcgccgaatgctgggtggacggatttcacgggtttacgccgcaggaattcgcggtg
ctggagcagcttgcccggcatgcggggaatgtgacgcttacgttgtgccttccccggcca
tatgtgaatggggaaggtctgcatgagcttgatttgttccacccgacggcacgcacgatg
ctggagctgcaggagcggctgcggcagcaggctatccatgtaacggatcatattgtgctg
cctgattcccctcccgcccgctttcggcataatccgatgcttgcttatctcgaagcgcat
tggggggacggagtcaagaggccgtttcccgaacccgcggaggtccgcaaaggaacgggt
tcgtccgtccgtatcttcgcagcggtcagccgcagggcggaggtagagggggtggcccgg
gatattgtaaagcttgtgcgggacgaaggcttgcgttggcgcgatatatccgtttccgtc
cgcagtgttgaagcctatggtgatttactggccggaacgttccgcgattacggtatcccg
catttcttcgatcagaagcgttcggtgctgcatcatccgctggtggaactgattcgctcg
gcgctggagacggtgctcacccattggaaatacgatgccgtgtttcgatgcgtcaaaacc
ggactgctcctgccctttgcggaagataaggaactgcagggagaccgcatacggatcgac
cgtcttgccatggaccagttggaaaactatgtgctggcctttggtattcaaggctccaaa
tggacggatccgaaggattggacttattcctatagaacgagcctggagcaggatgatgcg
gaggccggtgacgcggacgaggcttttttaacgaaaatcaatgcttgccggcgggcggta
gcagggccgcttggcgaactgcaaaagaagctgcgggagaaaaccgcggtacaagaccgc
gttcaagcggtatacgagctcctcatcggactccgggtgccggatcgcctggaagcatgg
agccagagctcgcttcatttgggcgagccggagaaagcgcgggagcatgcgcaggtatgg
gagcgggttatggatatgttcgatcagttgatcgagctgatgggggagcagtccgtatct
ctggagttgtttgccgaattgatccaaacgggattggaaagcatcaagctcgggcttgtt
cccccgacgcttgatcaggtattgatcggatcgatggacagaacccgctccggccgggtg
aagcacatgtttgtactcggtgtgaacgaaggcgttatgccggccaaaataaccgaaagc
ggcgtgctgacggaagcggagcgggaacggctcggcgcagccggccttcagactgccgaa
ggcagccgcagacggctgctggatgaatcgttcctgatctattgtgcattctgcacgccg
tccgacggattatggctcagttatgctttggccgatgaagaaggaaaatcgctgcttcct
tccgacgtgatccggcaaatcaagcggttgtttccgcaagtcagggaacggctgctgttg
aatgatccggctccggatgcggcgtccaccgagcagttggaatacatagcgcatcccgat
aaggcgctgtccttgctggttgtacaattaaagcaatggatgcagggagctccgatgagc
ggggtatggtggtccgtgtacaattggtttgcccggcagcctgaattcggcggcaggctt
tcccgaatggttcaatcgctgctctatacgaacaaggctgtggcgttaagcgattcgacc
agcaggcggctgtacggagagcatattgaaaccagcgtgtcgcggatggaacgattcgtc
gcttgtccgttttcgcaattcgcatcccatgggctgcggttgaaggaacgccggatcttc
cgcctggaagcccctgacgtaggccaactatttcatgcggctttgagcaagtttgccgag
caggtggagaaggagggcatcgattggggggcgctgacggcccgggagagcgaagagcgg
gccgcgctcgttgtcgatgcgctggcgcccaagctgcagggcgaaatcctgctcagctcc
aaaaggtatttgtatattgcccgcaagctgaagcaggtgatcggccgggccgctttgatg
ctgggcgagcatgccaaacgcggacaatttcgcccgatcgggctcgaaatcggttttgga
agcggacaggcgattcctccgctgctctacgagctggacaacggagttcttatggagctg
cgcggccggattgaccggattgaccgggcggatacggaacggggaacgttgctgagggtg
attgactataaatcaagcgccaaaatgctgaacatggccgaagtatattacgggctgtcc
ctgcaaatgttgacttatctggatgtcattttgacgcatgctccgatatggctgggcaca
gaagcggagcctgcaggcgtcctctattttcatgtacacaatccgctgctgaatgccaaa
aatggactgactgcggaacagatcgataaagagctgaaaaaacgcttcaaaatgaaagga
ctgcttcgggccgatcctgaagtgatcaagctgatggacagcagtctgattggggcaagc
ggccattccgagctgctgccggcggcgctcaaaacggatggcagcttctataaatcatcc
tctgtggcatcggaggagcagtggaatacggtcaggcggtatgtaagacggacgattcgc
gacatcggcacttcgatgacggacgggcgcattgatatcgagccgtatcggatggggcag
tccaccgcttgcagtcattgctccttccggccggtatgccagttcgacacgcagctggaa
ggcaacgattacagggtactgcctccgatcggcaaggatctcgtatgggagctgatggaa
aaacaaacggaatcaaagtcgcgcttccggccatccgcatcccgaaccgcagcccttgct
tcgttggaagtcgccgcttcggcagaagacgaaacggatcagcccgctgtagaagacggg
ttcattccgccctccggcagcaaagataacgagggaggcgagaccaaatga
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