Paenibacillus naphthalenovorans: IJ22_09810
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Entry
IJ22_09810 CDS
T04167
Name
(GenBank) stage V sporulation protein D
KO
K08724
penicillin-binding protein 2B
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp00550
Peptidoglycan biosynthesis
pnp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IJ22_09810
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnp01011
]
IJ22_09810
Peptidoglycan biosynthesis and degradation proteins [BR:
pnp01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IJ22_09810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
ALS21363
UniProt:
A0A0U2VCR9
LinkDB
All DBs
Position
997380..999686
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AA seq
768 aa
AA seq
DB search
MTRKVKLRSLIIGGAFTLLFVVLVTRLYWVQVVQGAELLSDAKMMWATDKELRPVRGTIL
DRNDKVLAEDSPAYTLALNPKIIHDKGIENEIVQGLSEILGNSNDSGALAALADKIRTRI
NQKRDDGSYYTQVEIRNEGWKIDAEIADKIKALEKELQQKLNTKKSLGILLLPESKRFYP
SGGLAAHLLGYMDKDGKPIMGLESQLDEYLKGESGWLSYEKDRYGVELPHSQRKYQPAVN
GDNVRLTLDKNIQFYMESAIQKVYEKWRPKSVTAIAVDPHTMEILGLANMPSFNPNKYWE
AKRQSDFVNHAVASQYEPGSTFKLVTLAAAVEEGIFNPNETYQSGSIAVPGRRLHDHNVS
GWGQISYLEGLKRSSNVAFVKLGYEKLGQDKLRAYIEKFGFGAKTGVDIAGEVAGIVNMR
YPAEFATATYGQGLTATAIQQTAAYAAIANGGKLMWPHLIKEIYNPETGEIIKKFEPKEI
RRVVSENTAKQVGEYLEQVVADQSIGTGRKAYIDGYRIAGKTGTANKVIPGQKGYAEGKW
VISFAGYAPLENPQILVTIIVDEPDLGGNYHLGGDVAAPAFKEIVSQTLRYMGIAPNTAD
QQHAQAAEQKMLAAVPDLTSLSLDQARKTMDKFGISVAAIGQGAGVIAQYPAPGTEIGGL
QRMYVMMQETKDVPVPDMTGKSLRDAIGLCSFLKLRCQSEGEGYVTSQTLEGAGEDRVLH
LRLHPYGETEENAESEKPQTNPNHDGAENGAENKENKEESAPSAPHGN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgactagaaaagtaaagttgcggtcgttaattattggaggggccttcaccctccttttt
gttgtcctggttacccgattgtattgggttcaagtggtccagggggcggaattgctgtcg
gacgcaaaaatgatgtgggcgacagacaaggagctcaggccggtacgtggcacgattttg
gaccgcaatgataaagtgcttgcggaggattcgcccgcctatacgctggcgctgaatccg
aaaatcattcatgataagggcatcgagaacgaaatcgttcagggactatctgaaattttg
ggcaattcgaatgattccggcgctttggcggcgcttgcggataaaatccgtacccggatc
aatcagaagcgagatgacggttcctattatacccaagtggaaattcggaatgaaggctgg
aagatcgatgcggagattgccgataaaatcaaagcgctcgagaaggagcttcaacagaag
ctgaatacgaaaaaaagcctgggcattctattgctgcccgagagcaaacggttttatccg
tccggaggtctggcggctcatctgctcggctacatggataaagatggcaaaccgatcatg
ggtttggaatcccagctggatgaatatctaaaaggcgaatccggatggctgagctatgag
aaagatcgctacggcgtggagctgccccattcccagagaaagtaccagccggccgtcaac
ggagacaacgtgaggctgacgctggacaaaaacatccagttttatatggagagcgccatc
caaaaagtgtacgaaaaatggcgtccgaaaagcgtgacggcgatcgcggtcgatccccat
accatggaaattctcggattggccaatatgccttcgttcaaccccaataaatattgggaa
gcaaagcggcaaagcgattttgtcaatcatgcggtagcttcccaatacgaaccgggatcg
accttcaagctggtcacgctcgctgcagcggtggaggaaggcattttcaatccgaatgaa
acctatcaatccggttcgattgccgtcccgggtcggaggctgcatgaccacaacgtctcg
ggctggggacaaatatcctatctcgaaggcttgaagcggtccagtaatgtcgcatttgtc
aagctggggtatgagaagctcgggcaggataagcttcgggcgtatatcgaaaagttcggt
ttcggcgcaaagaccggtgtggatattgccggagaagtcgccggaatcgtaaatatgcgt
tatccggcggaatttgccacagctacttacggtcaagggctgacggctacggcgatacag
cagacggcggcctatgcggccattgccaatggcggcaaattgatgtggcctcatttgatc
aaagaaatttataacccggaaacgggagaaattataaaaaaattcgaacccaaggaaatc
cgcagagtcgtttcggaaaacacggccaagcaggtcggtgaatatctggagcaggttgta
gccgaccaatcgataggtacgggaagaaaagcttatatcgacggctatcgcatagccggt
aagacaggtacggcgaataaggttattccgggtcagaaagggtatgccgaaggcaaatgg
gtgatttcgtttgccgggtatgcaccgcttgaaaatcctcaaattctggttaccattatc
gtcgacgaaccggacctggggggaaactaccatcttggaggggatgtagcggccccggcg
ttcaaggaaatcgtctcgcaaaccttgcgttatatgggcatcgcgccgaatacggcggat
caacagcacgctcaagcggcggaacagaagatgcttgccgctgttcccgatttgacaagc
ctgtcgcttgatcaagcccggaagacgatggacaaattcggcatttcggtagcggcgatc
ggccaaggagccggcgtgattgcacaatatcccgcccctggcaccgaaatcggaggcttg
cagcgaatgtatgtaatgatgcaggagacgaaagatgttccggtaccggacatgaccggc
aaatcgcttcgcgatgcgatcggactctgctccttcctcaagctgcgatgtcaatccgag
ggagaaggatatgtaacgagccagacgttggagggcgccggggaagaccgggtgctgcac
ctgcggctccatccttacggtgagacggaggagaatgccgaatcggagaaaccgcaaacc
aacccgaaccatgacggcgctgagaatggtgccgaaaataaagaaaataaagaggagtcc
gcaccctcggccccccacggcaattaa
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