Paenibacillus naphthalenovorans: IJ22_11720
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Entry
IJ22_11720 CDS
T04167
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp00300
Lysine biosynthesis
pnp00470
D-Amino acid metabolism
pnp01100
Metabolic pathways
pnp01110
Biosynthesis of secondary metabolites
pnp01120
Microbial metabolism in diverse environments
pnp01230
Biosynthesis of amino acids
Module
pnp_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
pnp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IJ22_11720
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IJ22_11720
Enzymes [BR:
pnp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IJ22_11720
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ALS21548
UniProt:
A0A0U2UE89
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Position
1189192..1190028
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AA seq
278 aa
AA seq
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MDFTKMHGLGNDFIVLAGHDELPRDASELAVRLCDRHFGIGADGMVYLLPSQKADYRMRI
INSDGSEAEQCGNAIRCAAKYIYDHGMVDKAATGLTIETIGAGVQPVQLSVTDGRVTAVR
VDMGAPVLNGLEVPTVIDAERIVSYPVSVDGQEFRFTAVSMGNPHCVIFTEDALQVDLYK
WGPELENHPLFPRRINVEFATVHSRDYADMRVWERGAGPTLACGTGACATLVAGVLNGLM
DRKATVSLKGGDLLIEWSEADNHVYMTGPAETVFKGTL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggatttcacgaaaatgcatggattgggaaatgattttatcgtgctggccggacatgac
gaactgcctcgggatgcatctgagctggcggttcgtttatgcgaccgtcatttcggcatc
ggtgcggacggaatggtctatttgctgccttcacagaaggctgactataggatgcgaatc
atcaattcggacggctcggaggcggagcagtgcggcaacgccatccgctgcgccgctaaa
tatatttatgatcacggaatggtggacaaagcggcaaccgggcttaccattgaaacgatc
ggtgcaggggtgcagcccgtgcagctttcggttacggacggacgagtgacggcggttcgc
gttgatatgggcgcgcctgttctgaacgggcttgaggtgcctacggtcatcgatgcggaa
cgtatcgtctcatacccggtttccgtagacggacaggaatttcgctttaccgccgtgtcg
atggggaatccgcactgcgtgatttttacggaagacgcgctccaggttgacctttacaag
tggggacccgaactggagaaccatccgttatttccccgccgcatcaacgttgagttcgct
acggtgcacagccgggattatgccgacatgcgcgtgtgggaacgcggagcagggccaacg
ctggcttgcgggacaggagcatgcgccacgttggtggccggggtgctgaacggactgatg
gaccgcaaggcgaccgtgtcgttaaaaggcggcgatctgctgatcgagtggagtgaggcg
gacaatcatgtctatatgaccggaccggcggaaacggtgtttaaaggaacgctttaa
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