Paenibacillus naphthalenovorans: IJ22_11770
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Entry
IJ22_11770 CDS
T04167
Name
(GenBank) subunit omega of DNA-directed RNA polymerase
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IJ22_11770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnp03021
]
IJ22_11770
03400 DNA repair and recombination proteins [BR:
pnp03400
]
IJ22_11770
Enzymes [BR:
pnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IJ22_11770
Transcription machinery [BR:
pnp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IJ22_11770
DNA repair and recombination proteins [BR:
pnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IJ22_11770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ALS21553
UniProt:
A0A0U2UI47
LinkDB
All DBs
Position
1193915..1194130
Genome browser
AA seq
71 aa
AA seq
DB search
MLYPSIDRLLDKVDSKYSLVVAASKRARMLRDGAKTEVQNQKSHKYVGLALEEIYEGHIS
YEKLYNKESIK
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacccttccatagatcggcttttggacaaagtagacagtaagtactctttggtg
gtcgccgcctccaaacgagcgcggatgcttcgtgacggagcgaagaccgaagtgcagaac
cagaaatcgcacaaatacgtaggtttggctcttgaggaaatttacgagggacatatctcg
tatgagaagctgtataacaaagaatccataaagtaa
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