Paenibacillus naphthalenovorans: IJ22_13060
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Entry
IJ22_13060 CDS
T04167
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pnp
Paenibacillus naphthalenovorans
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnp03016
]
IJ22_13060
Enzymes [BR:
pnp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IJ22_13060
Transfer RNA biogenesis [BR:
pnp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IJ22_13060
Prokaryotic type
IJ22_13060
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALS21682
UniProt:
A0A0U2KXT9
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All DBs
Position
1315027..1315959
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AA seq
310 aa
AA seq
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MTLEGILPIWKPKGFTSHDVVAKVRRIIRIKRIGHTGTLDPQVTGVLPLCIGRATRLVEY
VQEMPKAYEAVLRLGLCTDTQDMSGQVLQRLENPGGRVTPQQVTETIAQFVGTMEQVPPM
YSAVKVEGKRLYELARQGVEIERKARTVTIYSIEVLKTDWSGEFPEVRFRVKCSKGTYIR
TLCADIGAALGIPAVMGELVRTSSGNIGPEQCLTLEQVEELHERGALSDKLIPMEHVLSC
LPSVRLDDESARRALSGQKIRLEPAHWPQTDNSHADSGKPIAGFSGEGRLIGIFEWDPRR
GLLLPNKIFS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcgaaggcattttaccgatttggaagccgaaaggctttacttctcatgatgtg
gtggcaaaggttcgccggatcatacgaattaaacgaatcggccatacgggcacactggat
cctcaagtgaccggcgtgctgccgctttgtatcgggcgtgcgacccggttggtcgagtac
gtgcaggaaatgcccaaggcatacgaagccgtactccgtctgggtctttgtacggatacg
caagatatgagcggacaagtgcttcaaagattggagaatcctggaggaagggtgactcct
cagcaggtgaccgagacgatagcacagttcgttggaacgatggaacaagtgccgcctatg
tattccgctgtgaaagtggagggcaagcgcttatacgagttggcgcggcaaggcgttgaa
atcgagcgcaaggcacgcaccgttacgatctatagtatagaagtgctgaaaacggattgg
tcgggagaatttcccgaagtccggttccgcgtgaaatgttccaagggtacgtacatccgg
acgctgtgcgccgacattggtgcagcgctcggaatccctgcggtgatgggagagttggtg
cgaacgtcttcgggcaacatcggtccggagcagtgcttgaccttggagcaggtggaagag
cttcacgaacggggggcgctgtcggataagctgataccgatggaacatgtgctgagctgt
ttgccatcggtccgtttggatgatgaatcagcccgaagagcgctgtcaggacaaaaaatt
cgtttggagccggctcattggccgcagacggacaattcacatgcggattccggcaaacct
attgccggattctccggcgaaggccggttgatcggtatttttgaatgggatccgcggcgc
ggtcttttattaccaaacaaaatcttttcttga
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