Paenibacillus naphthalenovorans: IJ22_19170
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Entry
IJ22_19170 CDS
T04167
Name
(GenBank) prokaryotic histone-like domain-containing protein
KO
K03530
DNA-binding protein HU-beta
Organism
pnp
Paenibacillus naphthalenovorans
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnp03032
]
IJ22_19170
03036 Chromosome and associated proteins [BR:
pnp03036
]
IJ22_19170
03400 DNA repair and recombination proteins [BR:
pnp03400
]
IJ22_19170
DNA replication proteins [BR:
pnp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IJ22_19170
Chromosome and associated proteins [BR:
pnp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IJ22_19170
DNA repair and recombination proteins [BR:
pnp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IJ22_19170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
NTPase_1
HU-CCDC81_euk_1
HU-DNA_bdg
Pox_F12L
Motif
Other DBs
NCBI-ProteinID:
ALS22291
UniProt:
A0A0U2VFK7
LinkDB
All DBs
Position
1853487..1853813
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AA seq
108 aa
AA seq
DB search
MNKTDMINAVAGKTGFSKKDATTVIEATLEVITEALASGEKVQLVGFGSFEVRERAARDG
YNLKLLDELKKQGIPEEQTKEQAKIRIESSKVPAFKPAKGLKDTVAGK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatatgattaatgcagtagcaggtaaaacaggattttctaaaaaagat
gcaacaacagtaatcgaagcaactcttgaagtaatcacagaagcacttgcaagcggagaa
aaagttcaactggtaggtttcggatcgtttgaagtgcgtgaacgcgctgctcgtgatggg
tataatcttaaacttcttgacgaattgaagaaacaaggtatccctgaagaacaaacaaaa
gaacaagcaaagattcgtattgagtcttcaaaagttcctgcatttaaacctgcaaaagga
ctaaaagatactgttgcaggtaaataa
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