Paenibacillus naphthalenovorans: IJ22_21420
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Entry
IJ22_21420 CDS
T04167
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IJ22_21420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnp03400
]
IJ22_21420
DNA repair and recombination proteins [BR:
pnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
IJ22_21420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
AAA_27
nSTAND_NTPase5
AAA_29
ATPase_2
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ALS22516
UniProt:
A0A0U2W1U7
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Position
complement(2074317..2077010)
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AA seq
897 aa
AA seq
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MAKYTPMIEQYLAIKAEVQDAFLFFRLGDFYEMFFDDAVLASRELEITLTGRDGGAEERI
PMCGVPYHSAESYIARLVEKGYKVAICEQVENPAEAKGPVRREIVRIVTPGTVMDARLLG
ETSNNYIVAVVRSGEGYGFAACDISTGELYVTRLEGSFELLLDELNVYSPSEVLGSAALL
ERIRSGAAAWMKSAVMTPRERDGSSAGGGLSPEGHFSEAQLRSLPEGGRDTLALLMEYLQ
ETQKRSLTHIKHIRVYEPSQYMVMDPFTRRNLELVETVRDRSKKGTLLWLLDKTVTAMGG
RLLRRWIEKPLMNRTHIEERLEAVDLLYRQLIVRDELKQSLKEVYDLERLTARIAYGSAN
ARDLVALKASLAQVPKLRQLCETSGSATLAALAARIDPCQDLMASIEEAIVDDPPVSIRD
GGMIRAGLNARLDQLREASTNGKQWIAELEKHERERTGIKSLKIGFNKVFGYYIEVTKSN
LASLEEGRYERKQTLAGAERFVTPELKEKEALILEAQEGMVDLEYELFIQLRDKLAAHIP
RLQQLAELIATVDVYQSLAHVSSANRFTKPEISDEYELLIEQGRHPVVEAVLENGVFIAN
ETRLSKEDGSILLITGPNMAGKSTYMRQVAMIVLMAQIGCFVPAKSARIPIVDRIFTRIG
AADDLIGGQSTFMVEMMDIQVMTEKATAKSLVIIDELGRGTSTGEGMAIAQAVIEYLHDQ
IGCKTLVSTHFHELAHLEESLRELRNYCMAVKESGQQVTFLRKLIRGAASTSYGIYCAQI
AGLPSRIIDRSYELLHAFEARGELLQGQLQASAGESGERNEPKPPPQVKESEPVQSGQQE
VVQLSLFPIPEEKADKPSRKEAKADKVLEQLRSADLVNMTPMAAMNFLYELKKQLSS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatatacacccatgatcgaacagtacctcgccatcaaggcggaggtgcaggac
gcttttttgtttttccgtttaggcgatttctatgaaatgttttttgatgacgcggtgctg
gcttcccgcgagcttgaaatcacgctgaccggcagggacggcggcgcggaagagcgcata
ccgatgtgcggcgttccgtatcattcggcggaaagctatattgcccgcttggtagaaaaa
ggatataaggtcgccatctgcgaacaggtggagaatccggctgaggcgaaggggcctgtc
cggagggaaatcgtccgcattgtgacgccgggcacggtgatggacgcgcgtttgctcggc
gagacgagtaataactatatcgttgccgtcgtccgttccggagaaggctacggctttgcc
gcttgcgacatttctaccggagagctttacgtgacgcgtctggagggctcatttgagctg
ctgcttgacgagctgaatgtgtacagcccgtccgaggtgctgggcagtgccgcgctgctg
gagcgaatccgcagcggggcggcggcttggatgaaatcggcggtgatgacaccgcgggag
cgcgacgggtcgtcggcaggaggaggcttgtctccggaaggccatttctcggaggcgcag
cttcgctcgcttccggagggcggccgcgatacgctggcgctcttgatggaatatctgcag
gagacgcagaagcgttcgttgacgcacatcaagcatatccgggtctatgagcccagccag
tatatggtgatggacccgttcacacgccgtaatctggagctcgtcgagacggtgcgcgac
cggtcgaagaaagggacgcttttgtggctgctcgacaagacggtgacggcgatgggcggg
cggctgttgcgccgttggatcgagaagccgctcatgaaccggacgcatatcgaggaaagg
ctggaagcggtggatcttctgtaccgccaactgatcgtccgcgacgagctcaagcagtcg
ctgaaggaggtttacgatctggagcggctgacggcccgcattgcctacggcagcgccaac
gcgcgcgatctggtcgcgctcaaggcatcgctcgcgcaggtgcccaagctccggcagctt
tgtgaaaccagcggctccgccacgctggcggcgcttgcggcacggatcgatccgtgccag
gatctgatggcctccatcgaagaggccatcgtggacgaccctcccgtctccattcgggac
ggggggatgatccgggcggggctgaacgcccgcctggatcagcttcgcgaggcgagcacg
aacggcaagcagtggatcgccgagctggagaagcatgagcgggagagaacagggatcaaa
tcgctcaaaatcggatttaacaaagtgttcggctactacatcgaagtgacgaagtcgaat
ctggcctctctggaggaaggccgttatgaacggaagcagacgctggccggcgccgagcgg
ttcgttacgcccgagctaaaagaaaaggaagccctcattcttgaagcccaggaaggcatg
gtcgatctcgaatacgagctgtttatccagctgagggacaagctcgctgcacacatccca
aggctgcagcagctggccgagctgattgcgacggtggatgtgtaccagtcgctggcacac
gtgagcagcgcgaatcgctttacaaagcctgaaatcagtgacgaatatgagctgctcatt
gagcaagggcgtcatcccgtcgtggaagcggtgctggaaaacggcgtgttcattgccaac
gaaaccaggctgtctaaagaggatggcagcatcctgctgattaccggtccgaatatggcg
ggtaaaagcacctatatgcgccaggtggcgatgattgtcctgatggcgcaaatcggctgt
tttgttccggcgaagagcgcaaggataccgatcgttgaccgtattttcacgcgcatcggc
gcggccgacgatctgatcggcgggcagagcaccttcatggtcgagatgatggatattcaa
gtgatgaccgagaaggcgaccgccaaaagtcttgtcatcattgacgagctgggacggggg
acgtccacgggcgagggcatggcgatcgcacaggcggtgatcgaatatctgcacgaccag
atcgggtgcaaaacgctggtttcgactcattttcacgagttggcgcacctggaagaaagc
ctgcgggaactccgcaattactgcatggcggtgaaagaaagcggacagcaggtcacgttc
ctgcggaagctgatccgcggggcggcaagcaccagctacggcatttattgcgcgcaaatc
gccggtctgccgtccaggatcatcgaccgctcttacgagctgcttcatgcgtttgaagcg
cggggagagctgctgcagggacagcttcaggcatctgccggcgaaagcggagaacgcaat
gaacctaagccgcctccgcaggtaaaggagtccgagccggttcagtccgggcagcaagag
gtcgtgcagctgagcctcttccctatacccgaggagaaggcggacaagccttcccgaaag
gaggccaaagcggacaaggtgcttgaacagctgcgttcggccgatttggtgaatatgacg
ccgatggcggccatgaactttttatatgaattaaaaaaacaactgtcctcctaa
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