Paenibacillus naphthalenovorans: IJ22_24400
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Entry
IJ22_24400 CDS
T04167
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp00730
Thiamine metabolism
pnp01100
Metabolic pathways
pnp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
IJ22_24400
Enzymes [BR:
pnp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
IJ22_24400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
DUF6494
Motif
Other DBs
NCBI-ProteinID:
ALS22813
UniProt:
A0A0U2W5W0
LinkDB
All DBs
Position
2359038..2360819
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AA seq
593 aa
AA seq
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MASEIKEKEAAPHLSSFPGSKKVYVQGSREDIKVPMREISLTPTTSGGNVQENPPVRVYD
CSGPYTDGSIQTDIRSGLPLNRRNWILERGDVEEYAGRAVKPEDNGYSKEESVKREERFP
GLQRKPLRAKSGANVTQMHYARKGIITPEMEYIAIRENVSPEFVRSEVARGRAIIPCNIN
HPESEPMIIGSKFLVKINANIGNSAVASSIEEEVEKMRWATRWGADTIMDLSTGKHIHTT
REWIIRNSPVPIGTVPLYQALEKVGGKAEDLTWEIYRDTLIEQAEQGVDYFTIHAGVLLR
YVPLTAKRVTGIVSRGGSIMAAWCLAHHQENFLYTHFEEICEIMKTYDVAFSLGDGLRPG
CIADANDEAQFAELETLGELTRIAWKHDVQVMIEGPGHVPMHMIKENVDRQVEVCQEAPF
YTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNKNDVREGVIAYKI
AAHAADLAKGHPGAQERDNALSKARFEFRWRDQFHLSLDPERAMEYHDETLPAEGAKTAH
FCSMCGPKFCSMRITQDIREYAKQQGLEEQRAIEKGMEEKSREFKEAGSVIYK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgaaatcaaagaaaaagaagcagcccctcatctttcgtcttttccggggagc
aagaaggtgtatgtgcagggttcgcgggaggatattaaagtacctatgcgggaaattagc
ctaaccccgacaaccagcggcggcaatgtacaagagaacccgcctgtcagggtatatgat
tgcagcggtccatacacagacggcagcatccaaaccgatattcgctcgggacttccgctt
aaccgccggaattggatattggagcgcggcgatgttgaagaatatgcgggaagagcggtc
aagccggaggacaacggatattcaaaagaagaatccgtcaagcgggaagaacgatttccg
ggattgcagcgcaaaccgttacgagccaaaagcggagcgaatgtaacgcagatgcattat
gccagaaaaggaatcattacgcccgaaatggaatatatcgccatacgcgagaacgtctcc
ccggaatttgtccgcagcgaagtcgcacgaggccgggcgataattccgtgcaacatcaat
cacccggaaagcgagccgatgattatcggcagtaaatttttagtcaaaatcaatgccaat
atcggcaattcggctgtcgcttcgtcgattgaagaagaagtcgaaaaaatgagatgggcg
acccgctggggcgcagataccatcatggacctgtccacaggcaaacatattcataccact
cgtgaatggatcattcgcaactcccccgtgcccatcggtaccgtccctctttatcaggcc
ttggaaaaagtcggcggtaaagcggaggatctgacttgggaaatttatcgggataccctg
atcgaacaagccgaacaaggcgtcgactactttaccattcatgccggtgtgctgttacgc
tatgttcctttgacggcgaagcgggttacgggaatcgtatcccgcggcggttccatcatg
gcggcgtggtgtttggcgcatcatcaggaaaatttcctttatactcattttgaagaaatt
tgtgaaatcatgaaaacctatgacgtcgctttctcccttggtgatggattgcgcccggga
tgcattgcggatgccaatgatgaagctcaatttgccgaattggagacgcttggcgagctg
acccgaatcgcatggaagcatgatgttcaggtcatgattgaaggacccggccacgttcct
atgcacatgattaaagaaaatgtggatcgtcaggttgaagtatgccaggaagccccgttc
tataccttaggccctcttacgacagacatagccccggggtacgaccatatcacttcagct
atcggcgcagccatgatcggctggttcggtaccgccatgctttgttatgtaactccgaaa
gagcatctgggtcttccgaacaagaatgatgttcgcgaaggcgtcatcgcgtacaaaatc
gcagcccacgcggcggatttggccaaaggccatcccggagcccaggaaagggataacgcc
ttatccaaggcgcgttttgagttccgttggagagatcaatttcatttgtcgctggacccc
gaaagagctatggaataccatgacgagacgcttccagcggaaggcgccaagacggctcat
ttctgctcgatgtgcggccccaagttctgcagcatgagaattacacaggacattcgcgag
tatgccaaacagcaggggctcgaggaacagcgggccatcgaaaaaggcatggaggaaaaa
tccagagagtttaaagaagccggcagcgtcatttataaataa
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