Paenibacillus naphthalenovorans: IJ22_26510
Help
Entry
IJ22_26510 CDS
T04167
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pnp
Paenibacillus naphthalenovorans
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnp03000
]
IJ22_26510
Transcription factors [BR:
pnp03000
]
Prokaryotic type
Helix-turn-helix
Other families
IJ22_26510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
AAA_2
Mg_chelatase
HTH_30
AAA
AAA_16
HTH_28
AAA_3
PAS_4
HTH_23
HTH_psq
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ALS23024
UniProt:
A0A0U2M5F2
LinkDB
All DBs
Position
2578978..2580867
Genome browser
AA seq
629 aa
AA seq
DB search
MFESAFNLDIWNRFVREGVLDSSRLNQRIVESWYRSRNAHVNPHLDKGRSILNDDLLRCQ
MAKNALLQDIALPHLQRMNSFANDLGMIALLIDPEGYVLSISGNKDVQMAASKMNFVEGV
RWTEGEVGTNAIGTALSTEEPIMVTGTEHYSVASHRWSCSAAPIRHDDGKLIGILDVSCP
VDRAHPYMLGMVTSVAYSIEREISIRHHKDEMELIQRSMDIIETDRPVVICNNKQVVVCA
SKPIRHNMPGWIGSKPHDFMEYGYALQMEIPIYSNVHNGIIGSAVHFIEAKIKPAPLCFI
SQVPSTPFEFKGEKGISQAFQRTLDEMKRVAPSDTSVYISGETGTGKEVIARTIHENSSR
KNGPFVAVNCGAIPKDLMESELFGYAEGAFTGARRHGYKGKFEQANQGTLFLDEIGEIPH
SMQVALLRVLQERKVVPLGSAKEIPVDIRIITATHRDLGQLVKDGKFREDLYYRLHVYPI
DVPPLRERKEDIPYLVRYFCGKHQWNIPLHPALFERLLEYHWPGNIRELINVLERLHIVS
QGEEIAPLETMHVLDRLNIRGALSSNPSLEQNNTHIPANEPAPCSLRDQIQKEQMTEALQ
KTKGNVTMAAQLLGIPRSTFYKRLRKFNI
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaagcgcattcaaccttgatatttggaatcgcttcgttcgggaaggtgtgctt
gattcatcgcgcctcaatcaaaggatcgttgaatcttggtaccgttccaggaacgcgcat
gtgaatcctcatctggataagggcagatcgattttaaacgatgatctgcttcgctgccaa
atggccaaaaatgcactgcttcaggatatcgctctgcctcatctgcagcgaatgaattcc
tttgcgaatgatttgggcatgatcgcattattgattgatccggaaggttatgttctatcc
atttcgggcaataaagatgttcaaatggccgcatccaaaatgaattttgtcgaaggagtt
cgatggacggagggcgaagtcggcacgaatgccatcggtacagctttatcgacggaagaa
cccatcatggtaacgggtacggaacactattcggtggcttcccatcgctggagttgttct
gccgctcccattcgccacgatgacggaaagctcatcggcatcctcgatgtttcgtgtccg
gtcgaccgtgcccatccttatatgctcgggatggtgacttccgttgcttattcgattgaa
cgtgaaatcagtatacgccatcataaggatgagatggagctcatccagcgttccatggat
atcattgaaacggatcggcctgtcgtcatttgcaacaataagcaagtcgtggtatgcgcc
agcaaaccgattcgtcataacatgccgggatggatagggtcaaaacctcatgacttcatg
gaatatggatacgcgcttcaaatggagatccccatctattccaacgttcataacggaatc
atcggaagtgccgtccattttatagaggcgaaaataaagccggcccccctgtgtttcatc
tctcaggttccctctaccccgtttgaatttaaaggagaaaaaggtataagccaagctttt
caacgcacactggacgaaatgaaacgggtggccccctccgacaccagtgtttatatttca
ggagaaacaggaactggaaaagaagtcattgcccgaaccatccatgagaacagttcgcgg
aaaaacggaccctttgtggctgtaaattgcggagcgattccaaaggatctgatggaaagc
gaattgtttggctacgcggaaggagcttttacaggcgcacggcgccatgggtataagggg
aaatttgaacaagcgaatcaggggaccttatttctcgatgagattggagaaattccccat
tcgatgcaagttgcacttttacgcgttctccaggaacgaaaagtcgttcctcttggaagc
gccaaagagattcctgtcgatatcagaatcattacagctacgcatcgcgaccttggccag
cttgttaaggatgggaaatttcgtgaagacttgtattatcgtctccatgtttatccgatc
gatgtcccgcctttgcgtgaaaggaaagaagacataccgtacctggtccgatatttttgc
ggcaagcatcaatggaacatccccttgcatccggcattattcgagcggttattggaatac
cattggcccggcaatatacgggaactgatcaatgtgcttgaacgtttgcacattgtatcc
cagggtgaagagatcgcccctttggaaacaatgcatgttctggacagattaaatatccgc
ggagctctatcttcaaatccttcactggaacaaaacaacacccatatcccggcaaatgaa
ccggcaccctgcagcttgcgtgatcaaatccaaaaggagcagatgacggaagctttacaa
aaaacgaaaggcaatgtaacgatggccgctcaattattaggtataccccggagcactttt
tataaaagacttcggaagtttaatatatga
DBGET
integrated database retrieval system
